Litman, E., Myers, T., Agarwal, V. ...
· genomics
· Biostate AI
· biorxiv
Epigenetic clocks can predict biological age but cannot prescribe the interventions needed to reverse it. Here, we introduce REjuVenatIon Via Epigenetic Flow (REVIVE-Flow), a flow-matching model trained on a broad compendium of epigenetic blood studies to transport methylomes for...
Epigenetic clocks can predict biological age but cannot prescribe the interventions needed to reverse it. Here, we introduce REjuVenatIon Via Epigenetic Flow (REVIVE-Flow), a flow-matching model trained on a broad compendium of epigenetic blood studies to transport methylomes forward and backward in time. First, we learn the continuous vector field of aging as an Ordinary Differential Equation (ODE) within a stable, low-dimensional linear space. Then, the learned ODE\'s dynamics are integrated backward in time to define a natural, biologically-plausible rejuvenation trajectory. This path serves as a guide for a convex optimization problem that identifies the minimal, targeted CpG-level perturbation required to rejuvenate a sample. On a completely unseen test set comprising over 800 individuals from the European Prospective Investigation into Cancer and Nutrition (EPIC-Italy) cohort, Revive achieves 0.4 years rejuvenated per commanded year (R2=0.99), with a smooth sparsity-effect trade-off. Extensive validation confirms the effect preserves inferred cell-type composition and targets biologically plausible loci enriched in genomic regions and pathways central to aging biology.
Longevity Relevance Analysis
(6)
The paper claims to provide a method for rejuvenating biological age by identifying targeted epigenetic interventions. This research is relevant as it addresses the underlying mechanisms of aging and proposes a novel approach to potentially reverse biological aging, which is central to longevity studies.
Garst, S., Kuiper, L. M., van den Akker, E. B. ...
· health informatics
· Delft University of Technology
· medrxiv
Chronological age overlooks the heterogeneity in aging. In response, a wide range of molecular aging biomarkers has been developed to better capture an individual's aging rate. Yet, a comprehensive comparison of modeling choices in the development of these biomarkers is lacking. ...
Chronological age overlooks the heterogeneity in aging. In response, a wide range of molecular aging biomarkers has been developed to better capture an individual's aging rate. Yet, a comprehensive comparison of modeling choices in the development of these biomarkers is lacking. In this study, we trained aging biomarkers on the Rockwood frailty index (FI) and all-cause mortality using UK Biobank Olink proteomics and metabolomics (1H-NMR) data (n=40,696). We systematically established the impact of model choice, target outcome, and molecular data source on several age-related outcomes. From this, we developed ProteinFrailty (ProtFI), an elastic net model using a minimal set of proteins to predict FI. ProtFI outperformed established aging biomarkers in relation to diverse outcomes, including incident cardiovascular disease, handgrip strength, and self-rated health, both in internal validation and two Dutch external cohorts (n=996, n=500). Our findings show that an efficient frailty-trained proteomic biomarker robustly predicts age-related decline.
Longevity Relevance Analysis
(5)
The paper claims that the ProteinFrailty (ProtFI) model can efficiently predict age-related decline using a minimal set of proteins. This research is relevant as it addresses the heterogeneity in aging and aims to develop a biomarker that captures the biological aspects of aging, potentially leading to better understanding and interventions in age-related decline.
Tamatey, V., Varhegyi, M., Blaha, B. ...
· physiology
· HUN-REN Research Centre for Natural Sciences, Institute of Molecular Life Sciences, Budapest, Hungary
· biorxiv
Inorganic pyrophosphate (PPi) is a critical inhibitor of ectopic calcification, yet transcriptional regulation of genes controlling its systemic production and degradation (ABCC6, ALPL, ANKH, ENPP1) remains elusive. We hypothesized that PPi homeostasis is governed by evolutionari...
Inorganic pyrophosphate (PPi) is a critical inhibitor of ectopic calcification, yet transcriptional regulation of genes controlling its systemic production and degradation (ABCC6, ALPL, ANKH, ENPP1) remains elusive. We hypothesized that PPi homeostasis is governed by evolutionarily conserved transcription factor (TF) network. Promoter-motif analysis of PPi genes revealed conserved enrichment of nuclear receptor TFs (ESR1, NR4A1, RXRA, NR1H3/LXR) and metabolic regulators (SREBF1, CEBPB, HNF4A) across mouse and human orthologues. Supporting this, analysis of public RNA-seq datasets and RT-qPCR in wild-type and Abcc6-/- mice demonstrated tight co-expression of these genes in the liver and the kidney, as central transcriptional hub of systemic PPi regulation. Functionally, analyses in mice revealed age-dependent inverse coupling between plasma PPi concentration and serum alkaline phosphatase (AP) activity, with strongest impact during early life. Abcc6-/- mice exhibited persistently reduced although gradually increasing PPi and altered Pi/PPi ratios during aging. Translating these findings to humans, plasma PPi correlated inversely with AP activity and positively with Pi, though associations were weaker in ABCC6-deficient pseudoxanthoma elasticum patients. These results establish a conserved TF-driven program coordinating hepatic and renal expression of PPi homeostatic genes, highlight early-life sensitivity of PPi balance, and link gene-regulation to circulating mineralization factors, highlighting species-specific and pathology-driven differences.
Longevity Relevance Analysis
(4)
The paper claims that conserved transcriptional co-regulation of pyrophosphate homeostasis genes influences systemic mineralization factors in both mice and humans. This research is relevant as it explores the mechanisms of mineralization and pyrophosphate regulation, which are linked to aging processes and age-related diseases such as ectopic calcification.
Belik, J., Silvestre, F.
· genetics
· Laboratory of Evolutionary and Adaptive Physiology, Institute of Life, Earth and Environment, University of Namur, Rue de Bruxelles, 61, Namur, Belgium
· biorxiv
Background: Since Horvath (2013) and Hannum (2013), DNA methylation has emerged as a reliable biomarker for estimating age. Predictive models, called epigenetic clocks, are being built across the tree of life, including humans, other mammals and vertebrates and, recently, inverte...
Background: Since Horvath (2013) and Hannum (2013), DNA methylation has emerged as a reliable biomarker for estimating age. Predictive models, called epigenetic clocks, are being built across the tree of life, including humans, other mammals and vertebrates and, recently, invertebrates. However, it always involves cross-fertilizing organisms, thus presenting a high level of genetic diversity. To decipher the exact role of epigenetics in adaptation and evolution, distinguishing true epigenetic variation from changes that reflect genetic variation is essential. Results: Here, we used the mangrove rivulus, the only self-fertilizing vertebrate, to study epigenetic aging in the brain and construct an epigenetic clock. We generated a reduced representation bisulfite sequencing dataset of 90 brain tissues from individuals aged 60-1100 days to construct a highly accurate age predictor using 40 CpG sites (R squared > 0.96, mean absolute error of 28.7 days). We associated the CpG sites with their respective closest genes and explored their biological functions. Genes relevant to aging include lamin-A (responsible for several age-related processes), aryl hydrocarbon receptor (whose absence causes premature aging) and several genes associated with Alzheimer\'s disease identified in human studies. We also propose several methods to improve classic epigenetic clock regression. Conclusions: This study is the first construction of an epigenetic clock in a self-fertilizing species, demonstrating that DNA methylation patterns undergo consistent changes across the lifespan of isogenic individuals. These findings emphasize putative changes in DNA methylation related to functional changes across aging in the brain.
Longevity Relevance Analysis
(4)
The paper constructs an epigenetic clock in a self-fertilizing vertebrate, revealing consistent DNA methylation changes related to aging in the brain. This research is relevant as it addresses the underlying mechanisms of aging through epigenetic changes, contributing to our understanding of the biological processes involved in longevity.
Hayman, D. J., Simons, M. J. P.
· physiology
· University of Sheffield
· biorxiv
Biological regulation is a highly intricate process and involves many layers of complexity even at the RNA level. Alternative splicing is crucial in the regulation of which components of a protein-coding gene are spliced into a translatable mRNA. During ageing splicing becomes dy...
Biological regulation is a highly intricate process and involves many layers of complexity even at the RNA level. Alternative splicing is crucial in the regulation of which components of a protein-coding gene are spliced into a translatable mRNA. During ageing splicing becomes dysregulated and alternative splicing has been shown to be involved in disease and known anti-aging treatments such as dietary restriction (DR) and mTOR suppression. In prior work we have shown that DR and mTOR suppression modulate the expression of the spliceosome in the fly (Drosophila melanogaster). Here, we manipulated the five top genes that change in expression in both these treatments. We found that knockdown (using conditional in vivo RNAi in adults) of some spliceosome components rapidly induce mortality, whereas one, Rbp1, extends lifespan. Treatments that have more instant benefits on longevity are more translatable. We therefore subsequently repeated the Rbp1 experiment, but initiating Rbp1 at later stages in adult life. We find that irrespective of age of induction, knockdown of Rbp1 extends lifespan. Our results posit the spliceosome itself as a hub of regulation that when targeted can extend lifespan, rendering it a promising target for geroscience.
Longevity Relevance Analysis
(4)
Knockdown of the fly spliceosome component Rbp1 extends lifespan. The paper explores the role of the spliceosome in aging and demonstrates that targeting specific components can lead to lifespan extension, addressing a potential root cause of aging.
Shim, J., Onnela, J. P.
· health informatics
· Harvard T.H. Chan School of Public Health
· medrxiv
Background: Circadian rest-activity rhythmicity, a manifestation of circadian rhythms, characterizes 24-hour activity patterns. Growing evidence links disruption of circadian rhythms in late life to adverse outcomes, including functional and cognitive declines. Yet, most studies ...
Background: Circadian rest-activity rhythmicity, a manifestation of circadian rhythms, characterizes 24-hour activity patterns. Growing evidence links disruption of circadian rhythms in late life to adverse outcomes, including functional and cognitive declines. Yet, most studies have been cross-sectional or restricted to a single monitoring period, lacking longitudinal assessment. Consequently, it remains unknown whether deterioration or improvement in circadian rest-activity rhythmicity reflects late-life vulnerability in aging populations. Methods: We analyzed data from the National Health and Aging Trends Study (NHATS), a nationally representative U.S. cohort of adults aged [≥]70 years. In Cycles 11 and 12, participants completed 7-day wearable monitoring and assessments of functional, cognitive, and neuropsychiatric outcomes. Circadian biomarkers were derived using cosinor and non-parametric methods (amplitude, MESOR, acrophase, pseudo-F, RA, IS, IV, M10, L5). Participants were classified into four transition groups (Optimal, Improved, Deteriorated, Adverse). Survey-weighted regression and Cox models adjusted for demographics and comorbidities estimated associations, with multiple testing correction. Results: At baseline, weaker rhythm intensity (low amplitude, MESOR, M10, RA) and poor stability (high fragmentation, low regularity) were associated with greater ADL disability, lower SPPB, weaker grip strength, and poorer recall. Longitudinal analyses revealed a graded hierarchy of risk. Participants with deteriorating rhythms represented the most dynamic risk state: declining amplitude was linked to reduced SPPB ({beta}= -0.71, 95% CI: -0.98 to -0.44) and diminished immediate recall ({beta}= -0.60, 95% CI: -0.91 to -0.29). Declining regularity was also associated with impaired function (SPPB: {beta}= -0.52, 95% CI: -0.82 to -0.21) and cognition (immediate recall: {beta}= -0.43, 95% CI: -0.68 to -0.18, delayed recall: {beta}= -0.45, 95% CI: -0.70 to -0.20). By contrast, rhythmicity improvement aligned with stabilization. For neuropsychiatric outcomes, high fragmentation was linked to probable dementia, while poor regularity was tied to anxiety/depression. Conclusion: Circadian rest-activity rhythmicity is a robust and dynamic determinant of late-life outcomes. Persistent weakness or deterioration in intensity and regularity was linked to accelerated decline in function and cognition, whereas improvement aligned with stabilization. These findings position circadian rhythmicity as both an early biomarker of vulnerability and a potential modifiable target. Digital phenotyping via wearables offers a scalable, noninvasive framework for early risk detection, personalized intervention, and resilience promotion in aging populations.
Longevity Relevance Analysis
(4)
Circadian rest-activity rhythmicity serves as a dynamic determinant of late-life functional and cognitive outcomes. The paper is relevant as it explores the potential of circadian rhythms as biomarkers for vulnerability in aging populations, addressing a root cause of age-related decline rather than merely treating symptoms.
Deniz, O., Liu, Y., Kirkinen, T. ...
· cell biology
· University of Helsinki
· biorxiv
Anabolic and catabolic processes are coordinated by a conserved regulatory network, which includes the nutrient sensing protein kinase mTOR complex 1 (mTORC1) and the insulin- and stress-responsive transcription factor FoxO. In physiological setting these regulators align growth,...
Anabolic and catabolic processes are coordinated by a conserved regulatory network, which includes the nutrient sensing protein kinase mTOR complex 1 (mTORC1) and the insulin- and stress-responsive transcription factor FoxO. In physiological setting these regulators align growth, storage, reproduction, and aging with nutrient availability. Here, we identify transcription factor Spalt-related (Salr), previously implicated in organogenesis, as a negative regulator of growth and lipid storage. In the Drosophila fat body Salr activates catabolic gene expression and restricts mTORC1-mediated cell growth. The genomic binding of Salr overlaps extensively with that of FoxO and similar convergence is observed between their mammalian homologs SALL1 and FOXO1. Both Salr and FoxO are activated upon fasting but respond to distinct cues: while FoxO displays transient activation and is responsive to AKT inhibition, Salr is activated in a slow and sustained manner through the integrated stress response. Once activated, Salr counters nuclear localization of FoxO. Together, Salr and FoxO are converging transcriptional activators of catabolism during nutrient stress.
Longevity Relevance Analysis
(4)
The paper claims that the transcription factor Spalt-related (Salr) acts as a negative regulator of growth and lipid storage by activating catabolic gene expression in response to nutrient stress. This research is relevant as it explores the mechanisms of nutrient sensing and stress responses, which are critical in understanding the regulation of growth and metabolism in the context of aging and longevity.
Jia Li Ye, Klaudia Grieger, Dongchao Lu ...
· Aging cell
· Institute of Molecular and Translational Therapeutic Strategies (IMTTS), Hannover Medical School, Germany.
· pubmed
Pulmonary Fibrosis (PF) is a life-threatening illness that is characterized by progressive scarring in the lung interstitium. There is an urgent need for new PF therapies because current treatments only slow down the progression of fibrosis, and the median life expectancy post-di...
Pulmonary Fibrosis (PF) is a life-threatening illness that is characterized by progressive scarring in the lung interstitium. There is an urgent need for new PF therapies because current treatments only slow down the progression of fibrosis, and the median life expectancy post-diagnosis is only 4-6 years. Since PF patients frequently exhibit telomere attrition, overexpressing telomerase, the enzyme responsible for synthesizing telomeres, represents a compelling therapeutic option. In this study, we in vitro transcribed human telomerase reverse transcriptase (hTERT) mRNA using modified nucleosides (modRNA). ModRNA hTERT treatment led to transient activation of telomerase activity in a dose-dependent manner in MRC-5 cells and, importantly, in primary human alveolar type II pneumocytes. Consequently, the proliferative capacity was increased, concomitant with reduced DNA damage and elongated telomere length. Notably, the induction of cellular immune response was only detectable at the highest modRNA concentration and returned to normal levels within 48 h. Next, we demonstrated that circularized, exonuclease-resistant modRNA hTERT extended the transient expression profile, which may be clinically advantageous. Finally, we provided therapeutic proof of concept in organotypic 3D ex vivo human precision-cut lung slices derived from end-stage PF patients. Intriguingly, a single modRNA hTERT treatment inhibited senescence, as indicated by significantly lower levels of senescence-associated β-galactosidase. Pro-inflammatory markers (IL6 and IL8) and, concurrently, the key fibrosis mediators TGFβ and COL1A1 were markedly reduced after modRNA and circular RNA hTERT treatment. In conclusion, the data presented herein provide initial evidence for the potential of RNA-based hTERT therapy for treating human lung fibrosis.
Longevity Relevance Analysis
(5)
The paper claims that modRNA hTERT treatment can enhance telomerase activity and reduce markers of senescence and fibrosis in lung cells. This research is relevant as it addresses telomere attrition, a fundamental aspect of cellular aging, and proposes a novel therapeutic approach that could potentially mitigate age-related decline in lung function.
Yaru Liu, Pan Liao, Bo Yan ...
· Aging cell
· Department of Geriatrics, Tianjin Medical University General Hospital, Tianjin, China.
· pubmed
Aging leads to neurodegenerative diseases, such as cognitive decline, which are induced by persistent chronic low-grade inflammation in the brain driven by microglial activation. However, whether and how brain-derived exosomes from aged mice (A-exo) induce a pro-inflammatory stat...
Aging leads to neurodegenerative diseases, such as cognitive decline, which are induced by persistent chronic low-grade inflammation in the brain driven by microglial activation. However, whether and how brain-derived exosomes from aged mice (A-exo) induce a pro-inflammatory state and cellular senescence in microglia within the aging brain is poorly understood. Here, we report that brain-derived exosomes from aged mice (A-exo) cause cognitive decline in normal young mice, inducing microglial overactivation, lipid droplet accumulation, and senescence-associated secretory phenotype (SASP) secretion. This abnormal microglial activity arises from the elevated expression of PTGDS in A-exo due to mouse aging, resulting in increased central and peripheral D-prostanoid receptor 1 (DP1) ligand PGD2 levels, which subsequently leads to sustained DP1 signaling activation. Consequently, this process promotes myeloid cell infiltration, cellular senescence, and cognitive decline by generating a senescent, pro-inflammatory microglial phenotype. Blocking the DP1 receptor ameliorates A-exo-mediated microglial overactivation, myeloid cell infiltration, and cellular senescence. Strikingly, DP1 receptor blockade improves cellular senescence, neuroinflammation, and cognitive decline in aged mice. Our findings reveal a systemic mechanism underlying the sustained activation of microglia following brain aging, paving the way for improving chronic neuroinflammation, cellular senescence, and cognitive decline associated with aging.
Longevity Relevance Analysis
(4)
The paper claims that blocking the DP1 receptor can ameliorate microglial senescence and cognitive decline induced by aged brain-derived exosomes. This research addresses the underlying mechanisms of neuroinflammation and cognitive decline associated with aging, which are critical factors in longevity and age-related diseases.
Sharon E Mitchell, Lucile Heib, Cara L Green ...
· The journals of gerontology. Series A, Biological sciences and medical sciences
· School of Biological Sciences, University of Aberdeen, AB24 2TZ, Scotland, UK.
· pubmed
Calorie restriction (CR) is the reduction in calorie intake while avoiding malnutrition. CR increases longevity and attenuates the development of many age-related diseases, although some unfavourable responses have been reported. In response to CR, energy is withdrawn from tissue...
Calorie restriction (CR) is the reduction in calorie intake while avoiding malnutrition. CR increases longevity and attenuates the development of many age-related diseases, although some unfavourable responses have been reported. In response to CR, energy is withdrawn from tissues to correct the energy deficit. Changes in tissue mass over short-term, 3 months graded CR (STCR) were complex and while most tissues reduced size, some grew. Employing a graded long-term CR (LTCR) protocol in male C57BL/6J mice, tissue utilisation, digestive efficiency, bone health and motor coordination was investigated. Mice were restricted by 10-40% over 580 days/19 months and sacrificed at 24 months old. Control mice fed ad libitum in the 12hr darkphase only (12AL) were regarded as 0CR. The patterns of tissue weights, digestive efficiency, and bone measurements across the levels of CR were consistent between the STCR and LTCR studies, highlighting shared similarities over both experiments. Notable differences were enhanced utilisation of the reproductive accessory organs which could be linked to a shutdown of the reproductive axis; reduced utilisation of the spleen, changes in the hierarchy of investment in the digestive organs which was not linked to digestive efficiency. The vital organs were protected from utilisation, with preservation of the brain by CR, presumably linked to reduced neurodegeneration and sustained coordination. The favourable effects of LTCR on bone health contradict previous negative reports. Overall, morphological changes determined within 3 months of CR, persisted to 19 months. The pattern of tissue utilisation may be critical to the beneficial effects of CR.
Longevity Relevance Analysis
(4)
Long-term graded calorie restriction positively affects tissue partitioning, digestive efficiency, bone health, and motor coordination in male C57BL/6J mice. This study is relevant as it explores the effects of calorie restriction, a known intervention for extending lifespan and improving healthspan, by examining its impact on various physiological parameters associated with aging.
Randy Strong, James F Nelson, Molly A Bogue ...
· GeroScience
· Geriatric Research, Education and Clinical Center and Research Service, Department of Pharmacology, Barshop Institute for Longevity and Aging Studies, South Texas Veterans Health Care System, The University of Texas Health Science Center at San Antonio, San Antonio, TX, 78229, USA.
· pubmed
Mice bred in 2021 were tested by the Interventions Testing Program (ITP) for possible lifespan benefits of 2BAct (2BA), dichloroacetate (DCA), Epicatechin (EPI), Forskolin (FSK), Halofuginone (HAL) and Mitoglitazone (MIT). All agents were administered in the diet ad libitum begin...
Mice bred in 2021 were tested by the Interventions Testing Program (ITP) for possible lifespan benefits of 2BAct (2BA), dichloroacetate (DCA), Epicatechin (EPI), Forskolin (FSK), Halofuginone (HAL) and Mitoglitazone (MIT). All agents were administered in the diet ad libitum beginning at 7 months of age. In male mice, EPI increased median lifespan by ~ 5%, and HAL and MIT each increased median lifespan by ~ 9%. EPI and HAL, but not MIT, increased 90% survival. In addition to adding 3 new agents to the list of interventions identified by the ITP that extend lifespan, this report continues the strong male bias in the efficacy of life-extending drugs identified so far.
Longevity Relevance Analysis
(4)
The paper claims that epicatechin, halofuginone, and mitoglitazone extend lifespan in male genetically heterogeneous mice. The research is relevant as it investigates potential interventions that directly affect lifespan extension, contributing to the understanding of aging mechanisms.
Xin-Tian Yu, Lin Shi, Qiong Huang ...
· Caenorhabditis elegans
· Key Laboratory of Luzhou City for Aging Medicine, Department of Pharmacology School of Pharmacy, Southwest Medical University, Luzhou, 646000, Sichuan, China.
· pubmed
The progressive functional decline associated with aging is a primary risk factor for numerous chronic diseases. The discovery of natural compounds that can modulate conserved longevity pathways offers a promising strategy for promoting healthy aging. Hyperoside, a flavonoid abun...
The progressive functional decline associated with aging is a primary risk factor for numerous chronic diseases. The discovery of natural compounds that can modulate conserved longevity pathways offers a promising strategy for promoting healthy aging. Hyperoside, a flavonoid abundant in edible plants such as hawthorn, possesses various pharmacological activities, but its specific role and molecular mechanisms in geroprotection remain poorly understood. This study aimed to elucidate the anti-aging effects of hyperoside and its underlying mechanisms using the model organism Caenorhabditis elegans (C. elegans). Our results showed that hyperoside treatment significantly extended the mean lifespan of wild-type C. elegans by up to 19.97% and robustly enhanced healthspan by improving motility and reducing the accumulation of the aging biomarker lipofuscin. Hyperoside could also alleviate Parkinsonism in neurodegeneration models, without disrupting lipid homeostasis or reproduction. Furthermore, hyperoside conferred increased resistance to thermal, oxidative, and pathogenic stress. Mechanistically, the lifespan-extending effects of hyperoside requires the transcription factors DAF-16/FOXO, SKN-1/Nrf2, and HSF-1, and factors involved in immune and anti-oxidative response, including the MAPKK SEK-1 and p38 MAPK PMK-1. Hyperoside treatment promoted the nuclear translocation of DAF-16 and SKN-1 and upregulated their respective downstream target genes, including sod-3 and gst-4. Hyperoside also increased the expression of genes that are the downstream target of both PMK-1 and SKN-1. Since the role of SKN-1 in immune and anti-oxidative response were regulated by PMK-1. Therefore, the beneficial effects of hyperoside might be mediated primarily by activating SEK-1 /PMK-1/ SKN-1 pathway, which subsequently activate HSF-1 to maintain proteostasis. These findings underscore the potential of hyperoside as a dietary-derived agent for combating age-related functional decline.
Longevity Relevance Analysis
(4)
Hyperoside extends lifespan in C. elegans through the SEK-1/PMK-1/SKN-1 pathway. The study investigates a natural compound's role in modulating longevity pathways, directly addressing mechanisms of aging and lifespan extension.
Aashka Mohite, Karen Ardila, Pattarawut Charatpangoon ...
· Brain
· Department of Electrical & Software Engineering, University of Calgary, Calgary, Canada.
· pubmed
Neurodegeneration occurs when the body's central nervous system becomes impaired as a person ages, which can happen at an accelerated pace. Neurodegeneration impairs quality of life, affecting essential functions, including memory and the ability to self-care. Genetics play an im...
Neurodegeneration occurs when the body's central nervous system becomes impaired as a person ages, which can happen at an accelerated pace. Neurodegeneration impairs quality of life, affecting essential functions, including memory and the ability to self-care. Genetics play an important role in neurodegeneration and longevity. Brain age gap estimation (BrainAGE) is a biomarker that quantifies the difference between a machine learning model-predicted biological age of the brain and the true chronological age for healthy subjects; however, a large portion of the variance remains unaccounted for in these models, attributed to individual differences. This study focuses on predicting the BrainAGE more accurately, aided by genetic information associated with neurodegeneration. To achieve this, a BrainAGE model was developed based on MRI measures, and then the associated genes were determined with a Genome-Wide Association Study. Subsequently, genetic information was incorporated into the models. The incorporation of genetic information yielded improvements in the model performances by 7% to 12%, showing that the incorporation of genetic information can notably reduce unexplained variance. This work helps to define new ways of determining persons susceptible to neurological aging decline and reveals genes for targeted precision medicine therapies.
Longevity Relevance Analysis
(4)
The paper claims that incorporating genetic information into BrainAGE models can improve the accuracy of predicting biological brain age. This research is relevant as it addresses the underlying genetic factors associated with neurodegeneration, which is a significant aspect of aging and longevity.
Li Zhang, Benjamin Gottschalk, Felicia Dietsche ...
· Mitochondrial Membrane Transport Proteins
· University Medical Center of the Johannes Gutenberg-University Mainz, Institute for Molecular Medicine, Mainz, Germany.
· pubmed
Ion transport within mitochondria influences their structure, energy production, and cell death regulation. TMBIM5, a conserved calcium/proton exchanger in the inner mitochondrial membrane, contributes to mitochondrial structure, ATP synthesis, and apoptosis regulation. The relat...
Ion transport within mitochondria influences their structure, energy production, and cell death regulation. TMBIM5, a conserved calcium/proton exchanger in the inner mitochondrial membrane, contributes to mitochondrial structure, ATP synthesis, and apoptosis regulation. The relationship of TMBIM5 with the mitochondrial calcium uniporter complex formed by MCU, MICU1-3, and EMRE remains undefined. We generated Tmbim5-deficient Drosophila that exhibit disrupted cristae architecture, premature mitochondrial permeability transition pore opening, reduced calcium uptake, and mitochondrial swelling - resulting in impaired mobility and shortened lifespan. Crossing these with flies lacking mitochondrial calcium uniporter complex proteins was generally detrimental, but partial MICU1 depletion ameliorated the Tmbim5-deficiency phenotype. In human cells, MICU1 rescues morphological defects in TMBIM5-knockout mitochondria, while TMBIM5 overexpression exacerbates size reduction in MICU1-knockout mitochondria. Both proteins demonstrated opposing effects on submitochondrial localization and coexisted in the same macromolecular complex. Our findings establish a functional interplay between TMBIM5 and MICU1 in maintaining mitochondrial integrity, with implications for understanding calcium homeostasis mechanisms.
Longevity Relevance Analysis
(4)
The paper claims that TMBIM5 and MICU1 interact to maintain mitochondrial integrity, influencing lifespan and mobility in Drosophila. This research is relevant as it explores the mechanisms of mitochondrial function and calcium homeostasis, which are critical factors in aging and longevity.
Zeeshan Akhtar Khan, Anita Jagota
· Melatonin
· Neurobiology and Molecular Chronobiology Laboratory, Department of Animal Biology, School of Life Sciences, University of Hyderabad, Hyderabad, Telangana, 500046, India.
· pubmed
Sleep deprivation (SD) and aging are linked to chronic inflammation, a contributor to age-associated diseases. Circadian rhythms, governed by suprachiasmatic nucleus (SCN), regulate immune and inflammatory responses. While aging and SD elevate pro-inflammatory cytokines such as I...
Sleep deprivation (SD) and aging are linked to chronic inflammation, a contributor to age-associated diseases. Circadian rhythms, governed by suprachiasmatic nucleus (SCN), regulate immune and inflammatory responses. While aging and SD elevate pro-inflammatory cytokines such as IL-1β, TNF-α, and IL-6, their impact on temporal dynamics of inflammation across tissues and age groups remains unclear. This study examines age-dependent effects of chronic total SD on daily expression rhythms of inflammatory markers in central (SCN) and peripheral (cerebral cortex, liver, intestine) clocks of male Wistar rats aged 3 (adult), 12 (middle-aged), and 24 (old) months (m). Nitric oxide (NO), linked to inflammation and metabolism, was also evaluated in liver and intestine. Animals were sampled at four Zeitgeber (ZT) times. Further, the study examined the effects of melatonin, a circadian-regulated antioxidant, anti-inflammatory agent, and sleep synchronizer, on daily rhythms of inflammatory markers with aging and upon SD were studied. The mRNA expression levels of rTnf-α, rIl-6 and rIl-1β were assessed using qRT-PCR. NO levels were measured using Griess assay. Rats were grouped as control, SD, SD + melatonin and vehicle control groups. Significant SD-induced misalignment, especially in rIl-6 and rTnf-α in cerebral cortex and liver was observed in 12 m. SD altered circadian phases and expression levels were significantly greater in older rats (24 m > 12 m > 3 m) and in peripheral clock as compared to central clock liver > cerebral cortex > intestine > SCN. Melatonin differentially restored these rhythms, most effectively for rIl-1β and in the cerebral cortex and liver. SCN showed highest resilience, reinforcing its role as the central circadian pacemaker, while the liver and cerebral cortex emerged as the most vulnerable to SD and aging.
Longevity Relevance Analysis
(4)
The study claims that melatonin can restore circadian rhythms of inflammatory markers disrupted by sleep deprivation and aging. This research addresses the underlying mechanisms of inflammation and circadian disruption associated with aging, which are critical factors in age-related diseases and longevity.
Alyssa M Kaiser, Amirali Selahi, Wenjun Kong ...
· GeroScience
· Calico Life Sciences LLC, South San Francisco, USA.
· pubmed
Finite replicative potential is a defining feature of non-transformed somatic cells, first established by Leonard Hayflick in vitro using WI-38 human lung fibroblasts. Once proliferative capacity is exhausted due to telomere shortening, cells enter into a state called replicative...
Finite replicative potential is a defining feature of non-transformed somatic cells, first established by Leonard Hayflick in vitro using WI-38 human lung fibroblasts. Once proliferative capacity is exhausted due to telomere shortening, cells enter into a state called replicative senescence, which can be avoided through ectopic expression of telomerase reverse transcriptase (hTERT). As WI-38 cells approach replicative arrest, molecular pathways linked to mechanotransduction are induced, including YAP signaling, but the potential interplay between replicative lifespan and the mechanical environment of the cell remains unexplored. Here, we investigate the influence of mechanosensation on the trajectory towards replicative arrest taken by WI-38 cells by growing cells on substrates of varying stiffnesses. Matrix softening slowed proliferation, altered cellular phenotypes, and shortened proliferative lifespan while hTERT expression abrogated or reduced these responses. Our analyses of bulk and single-cell RNA-sequencing and ATAC-sequencing revealed the emergence of a unique G1 transcriptional state on soft substrates, characterized by an AP-1 transcription factor program, which failed to manifest with hTERT expression. Together, these findings reveal how the mechanical environment alters WI-38 cell proliferative lifespan and dictates unique paths towards growth arrest.
Longevity Relevance Analysis
(4)
The paper claims that substrate stiffness influences the proliferative lifespan of WI-38 cells and alters their trajectory towards replicative arrest. This research is relevant as it explores the mechanotransduction pathways that may contribute to cellular aging and senescence, potentially offering insights into the mechanisms underlying longevity and lifespan extension.
Vidak, S., Kim, S., Misteli, T.
· cell biology
· National Cancer Institute, NIH
· biorxiv
Hutchinson Gilford Progeria Syndrome (HGPS) is an ultra-rare pediatric premature aging disorder. The disease is caused by a point mutation in the LMNA gene leading to the production of the dominant-negative progerin isoform of the nuclear envelope protein lamin A. Disease severit...
Hutchinson Gilford Progeria Syndrome (HGPS) is an ultra-rare pediatric premature aging disorder. The disease is caused by a point mutation in the LMNA gene leading to the production of the dominant-negative progerin isoform of the nuclear envelope protein lamin A. Disease severity and progression amongst the population of ~140 known patients is variable. Most of the mechanistic insights into the disease have come from studies using cellular or mouse models of HGPS. To probe the clinical relevance of previously implicated cellular pathways and to address the extent of gene expression heterogeneity between patients, we have performed transcriptomic analysis of a comprehensive set of HGPS patients. We find misexpression of several cellular pathways across the patient population, particularly of multiple signaling pathways as well as the Unfolded Protein Response (UPR) and mesodermal cell fate specification. Variability amongst individual patients was limited, with misregulation of the major pathways observed in most patients. Comparing the transcriptome of patients with an inducible HGPS cell model, we distinguished immediate-early cellular response pathways from secondary adaptive pathways and identified mTORC1, the UPR, UV response, apoptosis and TNFalpha signaling via NF-kB as primary targets of the disease-causing progerin protein.
Longevity Relevance Analysis
(4)
The paper identifies key misregulated pathways in Hutchinson-Gilford Progeria Syndrome that are linked to the disease-causing progerin protein. This research is relevant as it explores the underlying mechanisms of a premature aging disorder, potentially informing strategies to address aging at a molecular level.
Christine Müller, Joscha S Muck, Kirill Ustyantsev ...
· Aging cell
· European Research Institute for the Biology of Ageing (ERIBA), University Medical Center Groningen (UMCG), University of Groningen, Groningen, the Netherlands.
· pubmed
The transcription factor CCAAT/enhancer binding protein alpha (C/EBPα) regulates cell differentiation, proliferation, and function in various tissues, including the liver, adipose tissue, skin, lung, and hematopoietic system. Studies in rats, mice, humans, and chickens have shown...
The transcription factor CCAAT/enhancer binding protein alpha (C/EBPα) regulates cell differentiation, proliferation, and function in various tissues, including the liver, adipose tissue, skin, lung, and hematopoietic system. Studies in rats, mice, humans, and chickens have shown that CEBPA mRNA undergoes alternative translation initiation, producing three C/EBPα isoforms. Two of these isoforms act as full-length transcription factors with N-terminal transactivation domains and a C-terminal dimerization and DNA-binding domain. The third isoform is an N-terminally truncated variant, translated from a downstream AUG codon. It competes with full-length isoforms for DNA binding, thereby antagonizing their activity. Expression of the truncated C/EBPα isoform depends on the initial translation of a short upstream open reading frame (uORF) in the CEBPA mRNA and subsequent re-initiation at a downstream AUG codon, a process stimulated by mTORC1 signaling. We investigated whether the ortholog of the CEBPA gene in the evolutionarily distant, short-lived African turquoise killifish (Nothobranchius furzeri) is regulated by similar mechanisms. Our findings reveal that the uORF-mediated regulation of C/EBPα isoform expression is conserved in killifish. Disruption of the uORF selectively eliminates the truncated isoform, leading to unrestrained activity of the full-length C/EBPα isoforms. This genetic modification significantly extended both the median and maximum lifespan and improved the healthspan of male N. furzeri. Furthermore, comparative transcriptome analysis revealed an upregulation of genes and pathways that are associated with healthspan and lifespan regulation in other species. These results highlight a conserved mechanism of CEBPA gene regulation across species and its potential role in modulating the lifespan and aging phenotypes.
Longevity Relevance Analysis
(5)
Disruption of the uORF in C/EBPα leads to extended lifespan and improved healthspan in African turquoise killifish. The study investigates a conserved genetic mechanism that influences aging and lifespan, addressing fundamental aspects of longevity research.
Helen M Blau, Ermelinda Porpiglia
· Annual review of pharmacology and toxicology
· 1Baxter Laboratory for Stem Cell Biology, Stanford University School of Medicine, Stanford, California, USA; email: hblau@stanford.edu.
· pubmed
Here I highlight personal and professional experiences that shaped my career and defined my scientific journey, with my longtime colleague, Ermelinda Porpiglia. I hope that sharing my life's adventures will inspire others to enjoy both a fulfilling scientific career and the fruit...
Here I highlight personal and professional experiences that shaped my career and defined my scientific journey, with my longtime colleague, Ermelinda Porpiglia. I hope that sharing my life's adventures will inspire others to enjoy both a fulfilling scientific career and the fruits of parenthood. I have always enjoyed addressing big questions and challenging dogma. In my early career I probed cell plasticity, challenging the dogma that a cell's specialized state is fixed and irreversible. I then sought to understand stem cells, crucial to tissue repair. Most recently, my lab discovered a gerozyme, 15-prostaglandin dehydrogenase (15-PGDH), a master regulator of muscle aging, and showed that muscle tissue is rejuvenated and strengthened when the gerozyme is inhibited with a small-molecule drug. It would be a dream come true if this discovery in my lab becomes a treatment for the debilitating muscle wasting arising from disuse, disease, or aging.
Longevity Relevance Analysis
(5)
Inhibition of the gerozyme 15-PGDH rejuvenates and strengthens muscle tissue, potentially countering muscle aging. This paper addresses a specific mechanism related to aging and proposes a potential therapeutic approach to mitigate age-related muscle degeneration.
David H Meyer, Alexei A Maklakov, Björn Schumacher
· Nature aging
· Institute for Genome Stability in Ageing and Disease, Medical Faculty, University of Cologne, Cologne, Germany. david.meyer@uni-koeln.de.
· pubmed
The mechanisms of aging are becoming increasingly well mapped; however, there remains ongoing debate about the ultimate and proximate causes of aging. The recent development of highly precise aging clocks led to a resurgence of arguments in support of a biological program of agin...
The mechanisms of aging are becoming increasingly well mapped; however, there remains ongoing debate about the ultimate and proximate causes of aging. The recent development of highly precise aging clocks led to a resurgence of arguments in support of a biological program of aging. However, the declining force of natural selection after the onset of reproduction means that cellular function could deteriorate without requiring a specific program. Here, we argue that aging clocks do not imply an intrinsic program but rather reflect the stochastic accumulation of molecular errors and damage. Damage accumulates due to insufficient maintenance and repair and contributes to system-wide entropy. In support of this, cross-species comparisons indicate that enhanced DNA repair capacity is a key determinant of exceptional longevity in mammals. By better understanding the nature of the stochasticity that governs the aging process, we will have a stronger mechanistic basis for developing geroprotective interventions to promote healthy aging in humans.
Longevity Relevance Analysis
(4)
The paper claims that aging clocks reflect the stochastic accumulation of molecular errors rather than an intrinsic biological program. This research is relevant as it addresses the fundamental mechanisms of aging and suggests pathways for developing interventions to promote healthy aging.
Keenan S Pearson, Sarah K Jachim, Caroline D Doherty ...
· Aging cell
· Department of Biochemistry and Molecular Biology, Mayo Clinic College of Medicine and Science, Rochester, Minnesota, USA.
· pubmed
Cellular senescence is an irreversible form of cell-cycle arrest caused by excessive stress or damage. While various biomarkers of cellular senescence have been proposed, there are currently no universal, stand-alone indicators of this condition. The field largely relies on the c...
Cellular senescence is an irreversible form of cell-cycle arrest caused by excessive stress or damage. While various biomarkers of cellular senescence have been proposed, there are currently no universal, stand-alone indicators of this condition. The field largely relies on the combined detection of multiple biomarkers to differentiate senescent cells from non-senescent cells. Here we introduce a new approach: unbiased cell culture selections to identify senescent cell-specific folded DNA aptamers from vast libraries of trillions of random 80-mer DNAs. Senescent mouse adult fibroblasts and their non-senescent counterparts were employed for selection. We demonstrate aptamer specificity for senescent mouse cells in culture, identify a form of fibronectin as the molecular target of two selected aptamers, show increased aptamer staining in naturally aged mouse tissues, and demonstrate decreased aptamer staining when p16 expressing cells are removed in a transgenic INK-ATTAC mouse model. This work demonstrates the value of unbiased cell-based selections to identify new senescence-specific DNA reagents.
Longevity Relevance Analysis
(4)
The paper claims to identify DNA aptamers that specifically target senescent cells. This research is relevant as it addresses cellular senescence, a key factor in aging and age-related diseases, by providing novel tools for identifying and potentially targeting senescent cells, which could contribute to understanding and mitigating the aging process.
McGovern, A. J., Duarte-Guterman, P., Galea, L.
· neuroscience
· Centre for Addiction and Mental Health
· biorxiv
Background: The hippocampus undergoes extensive cellular remodelling throughout life in response to multiple biological factors that shape its structure and function. Aging represents a fundamental driver of brain changes, with the hippocampus being particularly vulnerable to age...
Background: The hippocampus undergoes extensive cellular remodelling throughout life in response to multiple biological factors that shape its structure and function. Aging represents a fundamental driver of brain changes, with the hippocampus being particularly vulnerable to age-related concerns that contribute to cognitive decline and neurodegenerative disease risk. Reproductive experience, including pregnancy and motherhood, triggers profound hormonal fluctuations and metabolic demands that are increasingly recognized as major modulators of brain plasticity, yet represent an understudied and often paradoxical dimension of neurobiological variation. Although reproductive experience and aging are each known to influence biology across the dorsal and ventral hippocampus, their independent and interactive effects on cellular composition have not been systematically examined using quantitative approaches that can resolve cell-type-specific changes. Methods: We performed cell type deconvolution using Single-cell deconvolution of cell types (SCDC) on bulk RNA-sequencing data from female rat hippocampus, comparing nulliparous and parous females across young/older ages (7 month or 13 month old Sprague-Dawley rats, parous: 30 days or 6 months after giving birth) and dorsal/ventral regions. We harmonized 201 cell type annotations from three single-cell reference datasets into 23 biologically coherent categories utilizing female only data. Three-way ANOVA was used to identify independent and interactive effects. Complementary analyses (random forest, PCA, DESeq2) identified parity-associated transcriptional signatures. Cell-specific functional enrichment was performed by weighted gene set enrichment meta-analysis across multiple pathway databases and metrics. Results: Age emerged as the dominant factor affecting hippocampal cellular composition, significantly altering 6 harmonized cell types, particularly impacting microglia and oligodendrocytes. Regional effects were more extensive, affecting 9 harmonized cell types, while age x region interactions were minimal affecting two harmonized cell types. Critically, parity exerted independent effects on three cell populations: dorsal CA3 pyramidal neurons (p=0.0086-0.010 across two datasets) and SST interneurons (p=0.029) both showed 15-25% decreases, while astrocytes increased (p=0.022). Cell-type-specific pathway analysis revealed distinct molecular mechanisms with enrichment for protein degradation pathways in CA3 pyramidal neurons (GSK3B and BTRC:CUL1-mediated degradation; ubiquitin-dependent degradation of Cyclin D), neuroinflammation pathways in astrocytes, and GABAergic signaling disruption in SST interneurons (signaling receptor activity; GPCR ligand binding). Conclusions: Reproductive experience selectively remodels hippocampal cellular architecture through distinct, cell-type-specific molecular programs that operate independently of age and regional factors. These findings show parity as a critical biological variable requiring consideration in neuroscience and aging research and suggest specific cellular targets for understanding how reproductive history influences brain function.
Longevity Relevance Analysis
(4)
Reproductive experience remodels hippocampal cellular architecture through distinct molecular programs independent of age. This study highlights the influence of reproductive history on brain function, which is crucial for understanding mechanisms that may contribute to cognitive decline and neurodegenerative diseases associated with aging.
Shivani Ingole, Kanchan Khare, Veepin Dwivedi ...
· Ovary
· Division of Neuroscience, Department of Pharmacology, Smt. Kishoritai Bhoyar College of Pharmacy, New Kamptee, Nagpur, M.S. 441 002, India.
· pubmed
Ovarian aging is a significant biological process characterized by the gradual decline of ovarian function and fertility in women as they age. It is a multifaceted process that involves various molecular mechanisms. This review article delves into the complex nature of ovarian ag...
Ovarian aging is a significant biological process characterized by the gradual decline of ovarian function and fertility in women as they age. It is a multifaceted process that involves various molecular mechanisms. This review article delves into the complex nature of ovarian aging, marked by reductions in both the quantity and quality of oocytes, hormonal imbalances, and heightened risks of infertility and pregnancy complications. It consolidates current understanding of the physiological, cellular, and molecular mechanisms driving ovarian aging, such as mitochondrial dysfunction, oxidative stress, telomere shortening, DNA (Deoxyribonucleic Acid) damage, inflammation, and apoptosis. This review primarily focuses on human ovarian aging, while also integrating relevant insights from animal models particularly rodent studies that have contributed to our understanding of underlying mechanisms. It explores key signaling pathways involved in aging, including AMPK (AMP-Activated Protein Kinase), mTOR (mammalian target of rapamycin), Nrf2 (Nuclear Factor Erythroid 2-Related Factor 2), SIRT1 (Sirtuin 1), and FOXO3 (Forkhead Box O Transcription Factor) pathways. The review also discusses emerging therapeutic strategies designed to delay or reverse ovarian aging, which include antioxidants, hormone replacement therapy, stem cell-based treatments, CRMs (CR mimetics), gene therapy, and traditional medicines. Additionally, the article examines the potential role of polyamines in ovarian function and aging. By thoroughly analyzing the current research landscape and identifying future research directions, this review offers valuable insights for researchers and clinicians dedicated to improving reproductive health and quality of life for aging women.
Longevity Relevance Analysis
(4)
The paper discusses the mechanisms of ovarian aging and potential therapeutic strategies to delay or reverse this process. This research is relevant as it addresses the biological underpinnings of aging and seeks to improve reproductive health in aging women, aligning with longevity research goals.
Linda May-Zhang, Irwin Cheah, Ian Zajac ...
· The Proceedings of the Nutrition Society
· Blue California, Rancho Santa Margarita, California, USA 92688.
· pubmed
As the global population ages, the prevalence of cognitive decline is rising, creating urgent demand for proactive strategies that support brain health and healthy aging. Ergothioneine, a unique dietary amino-thione absorbed via the OCTN1 transporter, has recently gained attentio...
As the global population ages, the prevalence of cognitive decline is rising, creating urgent demand for proactive strategies that support brain health and healthy aging. Ergothioneine, a unique dietary amino-thione absorbed via the OCTN1 transporter, has recently gained attention for its potential as a neuroprotective, longevity-promoting compound. This review synthesizes growing evidence from observational, interventional, and mechanistic studies. Observational data consistently associate low blood ergothioneine levels with cognitive impairment, neurodegenerative diseases, cardiovascular disorders, frailty, and mortality. Interventional trials in older adults suggest that ergothioneine supplementation may improve cognition, memory, sleep quality, and stabilize neurodegeneration biomarkers, with no safety concerns at doses up to 25 mg/day. Mechanistic studies reveal that ergothioneine acts through multiple pathways: mitigating oxidative stress, reducing neuroinflammation, preserving mitochondrial function, and potentially modulating neurogenesis and NAD⁺ metabolism, although some mechanisms require further investigation. Beyond cognition, ergothioneine shows promise in supporting other physiological systems relevant to aging, including cardiovascular, metabolic, gut, eye, auditory, liver, kidney, immune, skin, and lung health. Together, current evidence positions ergothioneine as a promising nutritional intervention for promoting cognitive resilience and systemic health in aging, although larger, long-term interventional trials are needed to confirm causality and optimize use.
Longevity Relevance Analysis
(4)
Ergothioneine supplementation may improve cognitive health and support systemic health in aging. The paper discusses potential mechanisms and benefits of ergothioneine that align with addressing root causes of aging and promoting longevity.
Fatemeh Siavoshi, Matthew D Smith, Sandra Cassard ...
· Annals of neurology
· Department of Neurology, Johns Hopkins University School of Medicine, Baltimore, MD.
· pubmed
Reversing the aging process may yield significant benefits in people with multiple sclerosis (PwMS), as accelerated biological aging is observed in this population. Secondary analyses of 2 previously conducted dietary interventions including a 6-month modified ketogenic diet in 3...
Reversing the aging process may yield significant benefits in people with multiple sclerosis (PwMS), as accelerated biological aging is observed in this population. Secondary analyses of 2 previously conducted dietary interventions including a 6-month modified ketogenic diet in 39 participants and an 8-week randomized comparison of intermittent and daily calorie restriction versus a weight-stable regimen in 36 participants demonstrated significant decreases in metabolomic age (mAge) following the ketogenic diet (p = 0.009) and intermittent calorie restriction (p = 0.04), whereas daily calorie reduction had no effect. These findings indicate that fasting-mimicking diets (FMDs) can reverse accelerated metabolomic aging in PwMS. ANN NEUROL 2025.
Longevity Relevance Analysis
(4)
Fasting-mimicking diets can reverse accelerated biological aging in people with multiple sclerosis. This paper is relevant as it explores dietary interventions that may address the underlying mechanisms of biological aging, rather than merely treating symptoms of a disease.
Martin Poot
· Cytogenetic and genome research
· Not available
· pubmed
Ageing is a general, intrinsic and progressively deleterious process that affects all cells, tissues and organs albeit at different extent and rate in each individual. The complexity and universality of its phenotypic manifestations suggest a multifactorial origin. The autosomal ...
Ageing is a general, intrinsic and progressively deleterious process that affects all cells, tissues and organs albeit at different extent and rate in each individual. The complexity and universality of its phenotypic manifestations suggest a multifactorial origin. The autosomal recessive disorder Werner syndrome likely represents a segmental progeroid disorder since patients show several, but not all phenotypes of premature ageing.
Longevity Relevance Analysis
(4)
The paper investigates the molecular mechanisms underlying proliferative senescence and genomic instability in Werner syndrome, linking it to aging processes. This research is relevant as it explores the biological underpinnings of a progeroid syndrome, potentially offering insights into the root causes of aging and age-related diseases.
Christiane Hartmann, Christina Haß, Muriel Knobloch ...
· Aging cell
· Translational Neurodegeneration Section "Albrecht Kossel", Department of Neurology, Rostock University Medical Center, Rostock, Germany.
· pubmed
Microglia, the brain's resident immune cells, are crucial for maintaining healthy brain homeostasis. However, as the brain ages, microglia can shift from a neuroprotective to a neurotoxic phenotype, contributing to chronic inflammation and promoting neurodegenerative processes. D...
Microglia, the brain's resident immune cells, are crucial for maintaining healthy brain homeostasis. However, as the brain ages, microglia can shift from a neuroprotective to a neurotoxic phenotype, contributing to chronic inflammation and promoting neurodegenerative processes. Despite the importance of understanding microglial aging, there are currently few human in vitro models to study these processes. To address this gap, we have developed a model in which human microglia undergo accelerated aging through inducible progerin expression. HMC3-Progerin cells display key age-related markers such as activation of the senescence-associated secretory phenotype (SASP) as well as an increase in DNA damage. These prematurely aged HMC3 cells show a reduced response to LPS activation, exhibit impairments in essential microglial functions including decreased migration and phagocytosis as well as transcriptomic alterations including a shift observed in aging and neurodegeneration. Additionally, we observed an impaired stress response and a defect in nucleocytoplasmic transport, especially affecting the amyotrophic lateral sclerosis (ALS) associated protein FUS. This suggests that microglia play a contributory role in driving neurodegenerative processes in the aging brain. Our microglia aging model offers a valuable tool for exploring how aged microglia affect brain function, enhancing our understanding of their role in brain aging.
Longevity Relevance Analysis
(4)
The paper claims that prematurely aged human microglia exhibit impaired stress responses and defective nucleocytoplasmic shuttling of the ALS-associated protein FUS. This research is relevant as it explores the mechanisms of microglial aging, which contributes to neurodegenerative processes, thereby addressing root causes of aging-related dysfunction in the brain.
Supriya Shidhaye, Anis Ahmad Chaudhary, Mayuri Gajghate ...
· Neurodegenerative disease management
· Department of Quality Assurance, Smt. Kishoritai Bhoyar College of Pharmacy, Nagpur, India.
· pubmed
Parkinson's disease is a neurodegenerative disorder of aging with dopaminergic neuronal degeneration in the substantia nigra leading to motor dysfunction. Mitochondrial dysfunction is central to its pathophysiology, leading to oxidative stress, derangement of energy metabolism, a...
Parkinson's disease is a neurodegenerative disorder of aging with dopaminergic neuronal degeneration in the substantia nigra leading to motor dysfunction. Mitochondrial dysfunction is central to its pathophysiology, leading to oxidative stress, derangement of energy metabolism, and induction of neuronal apoptosis. Current therapeutic interventions are symptomatic but fail to stop disease progression. Stem cell-based regenerative strategies have been recognized as potential disease-modifying treatments. Mitochondria-augmented stem cell therapy offers a new mechanism for the correction of cellular bioenergetic deficits. Through genetic manipulations or preconditioning protocols, mesenchymal stem cells and induced pluripotent stem cells are engineered to enhance mitochondrial function and transfer. The engineered cells enable delivery of functional mitochondria into damaged neurons through tunneling nanotubes or extracellular vesicles, promoting ATP production, inhibiting reactive oxygen species, and restoring mitophagy. Preclinical models have demonstrated improved neuronal survival and motor function, and novel technologies like CRISPR gene editing and 3D bioprinting offer improved translational relevance.
Longevity Relevance Analysis
(4)
The paper claims that engineered stem cells can restore mitochondrial function in neurons affected by Parkinson's disease. This research is relevant as it addresses mitochondrial dysfunction, a key factor in aging and neurodegeneration, potentially offering a disease-modifying approach rather than merely symptomatic treatment.
Brooke Aggarwal, Yunling Gao, Alfonso Alfini ...
· Nature reviews. Cardiology
· Department of Medicine, Columbia University Medical Center, New York, NY, USA. baf2108@cumc.columbia.edu.
· pubmed
The interaction between sleep, circadian rhythms and cardiovascular resilience is a crucial yet underexplored research area with important public health implications. Disruptions in sleep and circadian rhythms exacerbate hypertension, diabetes mellitus and obesity, conditions tha...
The interaction between sleep, circadian rhythms and cardiovascular resilience is a crucial yet underexplored research area with important public health implications. Disruptions in sleep and circadian rhythms exacerbate hypertension, diabetes mellitus and obesity, conditions that are increasingly prevalent globally and increase the risk of cardiovascular disease. A National Heart, Lung, and Blood Institute workshop examined these connections, as well as the emerging concept of cardiovascular resilience as a dynamic and multifaceted concept spanning molecular, cellular and systemic levels across an individual's lifespan. The workshop emphasized the need to expand the focus from solely understanding whether and how sleep and circadian rhythm disturbances contribute to disease, to also exploring how healthy sleep and aligned circadian rhythms can increase cardiovascular resilience. To develop a Roadmap towards this goal, workshop participants identified key knowledge gaps and research opportunities, including the need to integrate biological, behavioural, environmental and societal factors in sleep and circadian health with cardiovascular research to identify therapeutic targets. Proposed interventions encompass behavioural therapies, chronotherapy, lifestyle changes, organizational policies and public health initiatives aimed at improving sleep and circadian health for better cardiovascular outcomes. Future cross-disciplinary research and translation of discoveries into public health strategies and clinical practices could improve cardiovascular resilience across the lifespan in all populations.
Longevity Relevance Analysis
(4)
The paper claims that healthy sleep and aligned circadian rhythms can enhance cardiovascular resilience across an individual's lifespan. This research is relevant as it explores the interplay between sleep, circadian rhythms, and cardiovascular health, addressing factors that could contribute to longevity and the prevention of age-related diseases.
Koch, Z., Nandi, S. P., Licon, K. ...
· bioinformatics
· University of California San Diego
· biorxiv
The DREAM complex has emerged as a central repressor of DNA repair, raising questions as to whether such repression exerts long-term effects on human health. Here we establish that DREAM activity significantly impacts lifetime somatic mutation burden, and that such effects are li...
The DREAM complex has emerged as a central repressor of DNA repair, raising questions as to whether such repression exerts long-term effects on human health. Here we establish that DREAM activity significantly impacts lifetime somatic mutation burden, and that such effects are linked to altered lifespan and age-related disease pathology. First, joint profiling of DREAM activity and somatic mutations across a single-cell atlas of 21 mouse tissues shows that cellular niches with lower DREAM activity have decreased mutation rates. Second, DREAM activity predicts the varied lifespans observed across 92 mammals, with low activity marking longer-lived species. Third, reduced DREAM activity in Alzheimer\'s patients predicts late disease onset and decreased risk for severe neuropathology. Finally, we show DREAM knockout protects against mutation accumulation in vivo, reducing single-base substitutions by 4.2% and insertion/deletions by 19.6% in brains of mice. These findings position DREAM as a key regulator of aging.
Longevity Relevance Analysis
(6)
The paper claims that the DREAM complex regulates somatic mutation burden, lifespan, and age-related disease pathology. This research is relevant as it explores a potential root cause of aging through the modulation of DNA repair mechanisms, linking it to lifespan and disease outcomes.
Tanaka, H., McCauley, B. S., Guida, C. ...
· genomics
· Cancer Genome and Epigenetics Program, Sanford Burnham Prebys MDI, La Jolla, CA, USA.
· biorxiv
Nucleosomes are the minimal repeating units of chromatin. Their dynamic assembly and disassembly underpins chromatin organization and genome regulation. However, it remains unclear how intrinsic nucleosome stability contributes to higher-level yet fundamental cellular and organis...
Nucleosomes are the minimal repeating units of chromatin. Their dynamic assembly and disassembly underpins chromatin organization and genome regulation. However, it remains unclear how intrinsic nucleosome stability contributes to higher-level yet fundamental cellular and organismal properties, such as preservation of cell identity, lineage specification, stress resilience and ultimately healthy aging. To address this, we tested the impact of decreased intrinsic nucleosome stability across multiple cell, tissue and organismal models by introducing histone mutants that weaken histone/histone interactions. While nucleosome instability did not broadly alter global chromatin accessibility, DNA damage, cell proliferation or viability, it impaired lineage-specific gene expression programs, altered lineage specification and activated intrinsic inflammatory and stress pathways in a manner reminiscent of aging in mouse tissues and human cells. Consistently, nucleosome instability accelerated the onset of age-associated transcriptional alterations and functional decline in Caenorhabditis elegans and Drosophila melanogaster, and reduced cellular resilience to exogenous perturbations, including environmental, epigenetic and mitotic stress in human cells and Saccharomyces cerevisiae. These cross-species findings identify nucleosome stability as an evolutionarily conserved epigenetic safeguard that preserves cell identity and stress resilience and supports organismal function and healthy aging.
Longevity Relevance Analysis
(5)
The paper claims that nucleosome stability is an evolutionarily conserved epigenetic safeguard that preserves cell identity and stress resilience, supporting healthy aging. This research addresses fundamental mechanisms underlying aging and cellular resilience, which are crucial for understanding and potentially mitigating the root causes of aging.
Britta Eggers, Maximilian Hausherr, Michel Lim ...
· Advanced biology
· Medizinisches Proteom-Center, Medical Faculty, Ruhr University Bochum, 44801, Bochum, Germany.
· pubmed
Physiological aging is accompanied by structural and molecular changes in the brain, with varying degrees in different brain areas, and is considered one of the major risk factors for neurodegenerative diseases. Thus, the present study focuses on elucidating age-related changes i...
Physiological aging is accompanied by structural and molecular changes in the brain, with varying degrees in different brain areas, and is considered one of the major risk factors for neurodegenerative diseases. Thus, the present study focuses on elucidating age-related changes in the substantia nigra pars compacta (SNpc), a brain region particularly vulnerable in Parkinson's disease. Here, the aim is to gain a spatially resolved view of aging-dependent alterations to conclude early processes potentially involved in neurodegeneration. Neuromelanin granules and SNpc tissue are isolated from tissue samples of young and elderly individuals via laser microdissection and measured by mass spectrometry to ascertain changes in protein expression in response to age. The findings include the identification of reduced levels of proteins involved in dopaminergic neurotransmission, either suggesting a specific loss of dopaminergic neurons or a reduction in metabolic activity. Furthermore, increased neuroinflammation is observed in elderly individuals and alterations in vesicular trafficking as well as mitochondrial proteins. Consequently, this exploratory study suggests that alterations causing known pathomechanisms of Parkinson's disease are already occurring in the physiological aging process. Since aging is still the most important risk factor for neurodegenerative diseases, these findings strengthen the necessity for studying age-related changes.
Longevity Relevance Analysis
(4)
The study identifies age-related alterations in the substantia nigra that may contribute to neurodegeneration. This research is relevant as it explores the biological changes associated with aging that could inform strategies for addressing age-related diseases.
Jiao Meng, Xiaopeng Li, Mingxi Hu ...
· ATPases Associated with Diverse Cellular Activities
· State Key Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, China.
· pubmed
Based on the importance of redox homeostasis, the concept of precision redox regulation has received widespread attention. As the main source of Reactive Oxygen Species (ROS) production, mitochondria play a dual role in this process: facilitating beneficial signal transmission an...
Based on the importance of redox homeostasis, the concept of precision redox regulation has received widespread attention. As the main source of Reactive Oxygen Species (ROS) production, mitochondria play a dual role in this process: facilitating beneficial signal transmission and causing excessive oxidative damage. Numerous studies have demonstrated that this duality is not only dependent on the quantity of ROS produced but also on the different sites of production, each showing varying effects. This insight underscores the necessity and importance of accurately regulating mitochondrial redox. However, the precise regulatory system remains unclear. In our study, we discovered that specifically knocking down the atad-3 (ATAD3A) gene significantly increased the level of mitochondrial ROS in nematodes and mammalian cells. We found that ATAD3A directly interacts with the complex I subunit NDUFS8, playing an integral role in complex I assembly and activity. Knocking down atad-3 reduces complex I activity and proton leakage, increases mitochondrial membrane potential, thereby inducing reverse electron transport (RET) to produce more ROS. The induced RET-ROS may serve as a protective response to impaired mitochondrial function, activating antioxidant systems that enhance stress resistance and extend longevity in nematodes. Our findings reveal a novel function and mechanism of knocking down ATAD3A to precisely regulate mitochondrial ROS production. They provide evidence for the beneficial role of RET-ROS as a signal promoting longevity and underscore the importance of precision redox.
Longevity Relevance Analysis
(4)
Knocking down ATAD3A increases mitochondrial ROS through reverse electron transport, which may enhance stress resistance and promote longevity in nematodes. The study addresses mechanisms that could influence aging processes by exploring mitochondrial function and redox regulation, which are critical in the context of longevity research.
Sarah-Eve Lemay, Yukimitsu Kuwabara, Sébastien Bonnet ...
· Cellular Senescence
· Pulmonary Hypertension Research Group, Québec Heart and Lung Institute Research Centre, Québec City, QC, Canada.
· pubmed
Pulmonary hypertension (PH) is a life-threatening disease increasingly being diagnosed in the elderly population, marked by vascular injury, excessive vasoconstriction and progressive remodelling of the pulmonary arteries (PAs). These lead to sustained elevation of PA pressure an...
Pulmonary hypertension (PH) is a life-threatening disease increasingly being diagnosed in the elderly population, marked by vascular injury, excessive vasoconstriction and progressive remodelling of the pulmonary arteries (PAs). These lead to sustained elevation of PA pressure and subsequent development of right ventricular failure. Despite the beneficial effects on disease progression and quality of life, current treatments do not cure PH, highlighting the need for a deeper understanding of the underlying mechanisms. Recently, cellular senescence has gained much attention as a stress response programme with substantial and somewhat controversial implications for both functional and structural changes within the pulmonary vasculature. Herein, we provide updated insights into the complex role and duelling good and bad effects of senescent cells in the development and progression of PH and discuss the novel therapeutic avenues that this connection opens. Finally, we identify challenges and unmet needs in understanding the two-faced nature of cellular senescence in PH and leveraging senescence therapeutically.
Longevity Relevance Analysis
(4)
The paper discusses the dual role of cellular senescence in the development and progression of pulmonary hypertension, highlighting potential therapeutic avenues. The focus on cellular senescence as a mechanism related to aging and its implications for treatment aligns with longevity research.
Maldonado-Garcia, C., Salih, A., Neubauer, S. ...
· cardiovascular medicine
· Centre for Advanced Cardiovascular Imaging, William Harvey Research Institute, Queen Mary University of London, NIHR Barts Biomedical Research Centre, Barts Hea
· medrxiv
Obesity is a global public health priority and a major risk factor for cardiovascular disease (CVD). Emerging evidence indicates variation in pathologic consequences of obesity deposition across different body compartments. Biological heart age may be estimated from imaging measu...
Obesity is a global public health priority and a major risk factor for cardiovascular disease (CVD). Emerging evidence indicates variation in pathologic consequences of obesity deposition across different body compartments. Biological heart age may be estimated from imaging measures of cardiac structure and function and captures risk beyond traditional measures. Using cardiac and abdominal magnetic resonance imaging (MRI) from 34,496 UK Biobank participants and linked health record data, we investigated how compartment-specific obesity phenotypes relate to cardiac ageing and incident CVD risk. Biological heart age was estimated using machine learning from 56 cardiac MRI phenotypes. K-means clustering of abdominal visceral (VAT), abdominal subcutaneous (ASAT), and pericardial (PAT) adiposity identified a high-risk cluster (characterised by greater adiposity across all three depots) associated with accelerated cardiac ageing - and a lower-risk cluster linked to decelerated ageing. These clusters provided more precise stratification of cardiovascular ageing trajectories than established body mass index categories. Mediation analysis showed that VAT and PAT explained 13.7% and 11.9% of obesity-associated CVD risk, respectively, whereas ASAT contributed minimally, with effects more pronounced in males. Thus, cardiovascular risk appears to be driven primarily by visceral and pericardial rather than subcutaneous fat. Our findings reveal a distinct risk profile of compartment-specific fat distributions and show the importance of pericardial and visceral fat as drivers of greater cardiovascular ageing. Advanced image-defined adiposity profiling may enhance CVD risk prediction beyond anthropometric measures and enhance mechanistic understanding.
Longevity Relevance Analysis
(4)
Compartment-specific fat distribution profiles are associated with distinct cardiovascular ageing trajectories and future cardiovascular events. The study addresses the relationship between fat distribution and cardiovascular health, which is crucial for understanding aging-related diseases and potential interventions.
Walker, E., Cockell, S., Needham, B. L. ...
· epidemiology
· Department of Epidemiology, School of Public Health, University of Michigan, Ann Arbor, MI, USA
· medrxiv
Biological aging, measured using DNA methylation, is a potential biomarker for cognitive health outcomes. We evaluated associations between DNA methylation measures of aging and cognition in a nationally representative sample of adults aged 60+ in the National Health and Nutritio...
Biological aging, measured using DNA methylation, is a potential biomarker for cognitive health outcomes. We evaluated associations between DNA methylation measures of aging and cognition in a nationally representative sample of adults aged 60+ in the National Health and Nutrition Examination Survey (NHANES), 1999-2002. Genome-wide DNA methylation data were used to create 13 measures of biological aging trained on different aging phenotypes. Cognition was assessed with the Digit Symbol Substitution Test (DSST). To evaluate associations between each DNA methylation measure and DSST score, survey-weighted linear regression models adjusted for age, sex, race/ethnicity, education, smoking, serum cotinine, and BMI were run. We assessed effect modification by sex, education, and race and ethnicity. Included participants (N=1,463) were an average of 70.5 years old and 82.7% non-Hispanic White. The average DSST score was 46.9 (SD 17.6). Ten of 13 DNA methylation measures were associated with DSST (adjusted p<0.05). One year of GrimAge2 accelerated aging was associated with -0.41 points lower DSST score (95% CI: -0.61, -0.21; adjusted p=5x10-4). In stratified analyses, higher magnitudes of association were observed among male and non-Hispanic White participants across multiple aging measures. DNA methylation may be a useful biomarker of cognitive status among older adults.
Longevity Relevance Analysis
(4)
DNA methylation measures of biological aging are associated with cognitive status in older adults. The study explores biological aging as a potential biomarker, which aligns with understanding the root causes of aging and its impact on cognitive health.
Orlichenko, A., Ding, S., Johns, E. ...
· health informatics
· Yale University
· medrxiv
Alzheimer's disease (AD) remains without effective treatment, largely due to the fact that clinical symptoms emerge only after decades of silent pathological progression. It is urgently needed to identify modifiable risk factors in earlier life stages, when preventive interventio...
Alzheimer's disease (AD) remains without effective treatment, largely due to the fact that clinical symptoms emerge only after decades of silent pathological progression. It is urgently needed to identify modifiable risk factors in earlier life stages, when preventive interventions may still be effective. Functional connectivity (FC) has emerged as a promising neuromarker for both neurodegenerative processes and behavioral traits, making it a potential bridge between early-life health profiles and late-life AD risk. In this work, we introduce a novel integrative framework that models how early-life lifestyle and physiological factors influence AD risk through their impact on brain FC. Our approach combines a modified variational autoencoder (VAE) that simulates FC changes under interventions with a predictive model that estimates AD risk based on FC patterns. This design enables training of the generative and predictive components under different datasets and populations, with FC acting as the bridge between early-life modifiable factors and late-life disease risk. Applying our framework to data from the Human Connectome Project (HCP), UK Biobank (UKB), and Alzheimer's Disease Neuroimaging Initiative (ADNI), we validate its ability to capture known risk factors, such as age and polygenic risk score, on FC-mediated AD risk. We also identify earlier-life modifiable factors including tobacco use, sleep quality, physical activity and weight/BMI that significantly influence AD risk. Notably, we observe a U-shaped relationship between blood pressure and AD risk, and highlight the brain visual and somatomotor networks as key mediators of risk through FC. Our approach provides a powerful tool for investigating the effect pathways linking early-life interventions to neurodegenerative outcomes, with broad applicability to other brain-related disorders.
Longevity Relevance Analysis
(4)
The paper claims that early-life modifiable lifestyle and physiological factors influence Alzheimer's disease risk through their impact on functional connectivity. This research is relevant as it seeks to identify and model interventions that could potentially mitigate the risk of Alzheimer's disease, addressing root causes associated with aging and neurodegeneration.
Gloria Garoffolo, Silvia Ferrari, Sara De Martino ...
· Histones
· Centro Cardiologico Monzino, IRCCS, Milan, Italy.
· pubmed
Calcification of the aortic valve is a prevalent cardiovascular pathology in the aging population. Traditionally linked to inflammation, lipid accumulation, and risk conditions, this disease remains poorly understood, and effective treatments to halt its progression are not yet a...
Calcification of the aortic valve is a prevalent cardiovascular pathology in the aging population. Traditionally linked to inflammation, lipid accumulation, and risk conditions, this disease remains poorly understood, and effective treatments to halt its progression are not yet available. We hypothesized that calcification of the human valve interstitial cells (VICs) is associated with cellular senescence and alterations in the epigenetic setup, like in arteries. To verify this hypothesis, we examined the epigenetic marks (DNA methylation; Histones H3/H4 acetylation/methylation), the senescence and the calcification process in human VICs obtained from two distinct pathologic settings of the aortic valve (valve insufficiency and valve stenosis), and employed a mouse model of vascular/valve calcification, based on the administration of Vitamin D. Our findings revealed a link between the senescent phenotype of human VICs and calcification, characterized by increased DNA methylation and changes in histone epigenetic marks. To reverse the senescent/calcific VICs phenotype, we used Pentadecylidenemalonate-1b (SPV106), which activates KAT2B/pCAF histone acetyltransferase. In human VICs, SPV106 restored Histone acetylation marks, modified general chromatin accessibility and upregulated expression of Notch1, a potent inhibitor of valve calcification. The treatment also prevented the accumulation of calcific lesions in an ex vivo model of aortic valve calcification. In vivo treatment with SPV106 reduced calcification of the valve induced by administering Vitamin-D and positively preserved the valve motion compromised by calcification and the overall cardiac function. Based on these results, we propose the treatment with activators of histone acetylates as a viable option to prevent senescence/calcification of aortic VICs via restoration of correct chromatin acetylation, with concrete hopes to retard the progression of valve stenosis, a still largely unmet therapeutic need.
Longevity Relevance Analysis
(4)
The paper claims that activating histone acetylation can reverse calcification in aortic valve interstitial cells, potentially addressing a root cause of age-related cardiovascular disease. The research focuses on cellular senescence and epigenetic modifications, which are key factors in the aging process and their implications for longevity.
Alba-Linares, J. J., Tejedor, J. R., Fernandez, A. F. ...
· molecular biology
· CINN-CSIC
· biorxiv
Loss of epigenetic information has been proposed as a potential driver of mammalian aging. However, its contribution to the well-documented variation in lifespan estimates among mammals remains to be elucidated. In this study, we examined DNA methylation entropy patterns at evolu...
Loss of epigenetic information has been proposed as a potential driver of mammalian aging. However, its contribution to the well-documented variation in lifespan estimates among mammals remains to be elucidated. In this study, we examined DNA methylation entropy patterns at evolutionarily conserved CpG sites across multiple mammalian species to quantify age-associated epigenetic information loss. We found that longer-lived species tend to accumulate fewer CpGs exhibiting increased methylation noise over time, irrespective of whether these changes arise from hyper- or hypomethylation mechanisms. Importantly, the rate of epigenetic entropy gain declines in a linear fashion with species' maximum lifespan, pointing to the existence of a universal constraint on mammalian longevity, estimated to lie in the vicinity of 220 years. We further demonstrated that this relationship and its associated limit were independent of species and sample selection, as well as phylogenetic relatedness, and remained robust across different scenarios of lifespan estimation uncertainty. Collectively, this work highlights the maintenance of epigenetic information as a key factor in explaining lifespan differences among species and proposes a universal maximum limit to natural mammalian longevity.
Longevity Relevance Analysis
(5)
The paper claims that the rate of epigenetic entropy gain declines linearly with species' maximum lifespan, suggesting a universal constraint on mammalian longevity. This research is relevant as it addresses the underlying mechanisms of aging through the lens of epigenetic information loss, contributing to our understanding of lifespan variation among mammals.
Sirvio, L., Morten, M. J., Burridge, M. ...
· cell biology
· Imperial College London
· biorxiv
Proteasomes reversibly form foci bodies in a liquid-liquid phase separation (LLPS)-dependent manner upon stress. We previously reported that internalized protein aggregates were targeted by proteasome-dense foci1, and proposed that such transient aggregate-associated droplets (TA...
Proteasomes reversibly form foci bodies in a liquid-liquid phase separation (LLPS)-dependent manner upon stress. We previously reported that internalized protein aggregates were targeted by proteasome-dense foci1, and proposed that such transient aggregate-associated droplets (TAADs) may facilitate aggregate removal2. Here we use quantitative imaging to show that TAADs represent a novel type of gel-like proteasome condensate. TAADs are irregular in shape and slow to disperse, sequestering proteasomes in alignment with our observation of confined diffusion3. We demonstrate that TAADs co-localize with cytosolic alpha-synuclein aggregates to facilitate their clearance. Inhibition of proteasome or ubiquitination activity abolish this aggregate clearance. We identify RAD23B necessary for TAAD formation, amid other co-localizing chaperones and (co-)proteins of the ubiquitin-proteasomes system. TAAD formation is associated with higher proteasomal substrate turnover whilst retaining overall catalytic efficiency, suggestive of altered degradation mechanisms upon aggregate engagement. Proteomics analysis show impact on key mitochondrial-associated processes even after apparent clearance of aggregates. Similar TAAD-aggregate co-localizations can be observed in iPSC-differentiated neurons and in disease-relevant samples, with no detection of compromised proteasome activity. Together, our results indicate a model where TAADs concentrate local proteasome activity, which facilitates aggregate clearance in healthy ageing cells. Potentially with persisting pathological aggregates, TAADs may remain engaged and conceivably sequester proteasomes from physiological activities, thus contributing to neurodegenerative disorders.
Longevity Relevance Analysis
(4)
The paper claims that transient aggregate-associated droplets (TAADs) facilitate the clearance of toxic protein aggregates through concentrated proteasome activity. This research is relevant as it explores mechanisms that could influence cellular health and longevity by addressing the accumulation of toxic aggregates, which are implicated in neurodegenerative diseases associated with aging.
Thai, T., Wellman, S., Suematsu, N. ...
· neuroscience
· University of Pittsburgh
· biorxiv
Aging disrupts brain network integration and is a significant risk factor for cognitive decline and neurological diseases, yet the circuit-level mechanisms underlying these changes remain unclear. Most previous studies have utilized cross-sectional or acute approaches, limiting i...
Aging disrupts brain network integration and is a significant risk factor for cognitive decline and neurological diseases, yet the circuit-level mechanisms underlying these changes remain unclear. Most previous studies have utilized cross-sectional or acute approaches, limiting insights into the longitudinal dynamics of the neural network. In this study, we chronically recorded laminar electrophysiological activity in both the primary visual cortex (V1) and hippocampal CA1 region of young (2-month-old) and aged (13-month-old) mice over 16 weeks. This approach allowed us to directly assess how aging modulates functional connectivity within hierarchically connected cortical and hippocampal circuits. We found that single-unit spiking activity and the signal-to-noise ratio were largely preserved in aged versus young mice, suggesting intact neuronal firing properties. However, aged mice showed global reductions in local field potential (LFP) power and a selective decrease in coherence across delta, alpha-beta, and gamma frequency bands within and between cortical layers and V1-CA1 pathways, while phase amplitude coupling remained unaffected. Interestingly, population level excitatory activity in CA1 was increased in aged animals. These findings indicate that aging selectively impairs network-level synchrony and temporal coordination in specific frequency bands and regions, with minimal loss of single-neuron function. Our results highlight the necessity of longitudinal, multi-region measurements to uncover the multi-scale vulnerabilities of the aging brain. Understanding the depth- and region-dependent circuit changes will guide strategies to preserve cortical-hippocampal communication and cognitive function in aging, as well as enhance neural interface technologies for older populations.
Longevity Relevance Analysis
(4)
Aging selectively impairs network-level synchrony and temporal coordination in specific frequency bands and regions of the brain. This study addresses circuit-level mechanisms of aging, which is crucial for understanding the underlying processes of cognitive decline and developing strategies to mitigate age-related cognitive impairments.
Sheeja Navakkode, Brian K Kennedy
· Aging cell
· Healthy Longevity Translational Research Program, Yong Loo Lin School of Medicine, Centre for Healthy Longevity, National University Health System, National University of Singapore, Singapore, Singapore.
· pubmed
Alzheimer's disease (AD) is one of the most prevalent neurodegenerative disorders, characterized by a progressive decline in cognitive function. Increasing evidence indicates that alpha-ketoglutarate (AKG), a key metabolite in the tricarboxylic acid (TCA) cycle, can extend lifesp...
Alzheimer's disease (AD) is one of the most prevalent neurodegenerative disorders, characterized by a progressive decline in cognitive function. Increasing evidence indicates that alpha-ketoglutarate (AKG), a key metabolite in the tricarboxylic acid (TCA) cycle, can extend lifespan and healthspan across various animal models, raising interest in its potential neuroprotective effects in age-related disorders such as AD. Our previous research found that dietary supplementation with calcium alpha-ketoglutarate (CaAKG), a calcium derivative of AKG, enhances both lifespan and healthspan in mice. However, little is known about the neuroprotective role of AKG/CaAKG in AD. Here, we show that CaAKG could rescue synaptic deficits that are associated with AD. Treatment with AKG or CaAKG ameliorates long-term potentiation (LTP) at hippocampal CA1 synapses in APP/PS1 mice, with a more profound effect in female AD mice than in males. The effects of CaAKG were mediated through an NMDA receptor-independent mechanism involving L-type calcium channels (LTCC) and calcium-permeable AMPA receptors (CP-AMPARs). Analysis of protein expression showed that AD hippocampal slices treated with CaAKG exhibited increased LC3-II levels, indicating enhanced autophagy. Similarly, rapamycin, an mTOR inhibitor, also rescued LTP deficits in AD mice, suggesting that the observed increase in autophagy may contribute to neuroprotection. Interestingly, rapamycin showed differential effects, as it rescued LTP in AD mice but blocked LTP in WT mice. We also observed that CaAKG facilitated synaptic tagging and capture (STC), a widely studied cellular model for associative memory, indicating its potential to facilitate associative memory. Overall, our findings suggest that CaAKG has neuroprotective effects in APP/PS1 mice. We propose CaAKG as a promising therapeutic target not only for aging but also for AD and potentially other age-associated neurodegenerative diseases, highlighting geroprotective strategies as viable alternatives for the prevention and treatment of AD.
Longevity Relevance Analysis
(4)
The paper claims that calcium alpha-ketoglutarate (CaAKG) ameliorates synaptic plasticity deficits in a mouse model of Alzheimer's disease through mechanisms that may enhance autophagy. The research is relevant as it explores a potential therapeutic target that addresses underlying mechanisms associated with aging and neurodegeneration, rather than merely treating symptoms.
Haberman, R. P., Delgado, A., Xiao, M. ...
· neuroscience
· Johns Hopkins University
· biorxiv
Changes in synaptic integrity and neural activity homeostasis are hallmarks of brain aging and are closely tied to cognitive outcomes. Yet, defining their relationship across the continuum from normal aging to neurodegenerative disease has proven challenging. Recent research inve...
Changes in synaptic integrity and neural activity homeostasis are hallmarks of brain aging and are closely tied to cognitive outcomes. Yet, defining their relationship across the continuum from normal aging to neurodegenerative disease has proven challenging. Recent research investigating the dynamic changes of neuronal pentraxin 2 (NPTX2, or Narp, neuronal activity-related pentraxin) in cerebrospinal fluid (CSF) of Alzheimer\'s disease (AD) subjects supports its promise as a prognostic marker of disease progression, possibly as an expression of synaptic damage related to cognitive impairment. However, studies in human subjects are unable to clearly differentiate age-related and disease-related processes. Here we took advantage of a well-characterized rat model that displays substantial individual differences in hippocampal memory during aging, uncontaminated by slowly progressive, spontaneous neurodegenerative disease. Through this approach, we aimed to interrogate the underlying neural substrates that mediate aging as a uniquely permissive condition and the primary risk for neurodegeneration. We found that successful cognitive aging is associated with an elevation of NPTX2 levels above that found in young or cognitively impaired subjects. Pharmacological engagement of neural activity was sufficient to increase NPTX2 levels in all subjects, but cognitively-impaired aged subjects failed to recruit NPTX2 in response to a hippocampus-dependent memory task. Together the findings demonstrate that changes in NPTX2 are coupled to differential cognitive outcomes of aging, and that successful neurocognitive aging is associated with adaptive upregulation of NPTX2, not simply the persistence of youthful synaptic dynamics.
Longevity Relevance Analysis
(4)
The paper claims that successful cognitive aging is associated with an adaptive upregulation of NPTX2 levels, which is impaired in cognitively impaired aged subjects. This research is relevant as it explores the underlying mechanisms of cognitive aging and potential biomarkers that could inform interventions aimed at promoting healthier aging and mitigating age-related cognitive decline.
Aggarwal, S.
· neuroscience
· Indian Institute of Science
· biorxiv
Predicting human lifespan is a longstanding objective of biomedical research. Traditional statistical models estimate mortality risk or biological age but not lifespan. We propose a two-parameter model based on stochastic fractional harmonic oscillator for neural signals. The mod...
Predicting human lifespan is a longstanding objective of biomedical research. Traditional statistical models estimate mortality risk or biological age but not lifespan. We propose a two-parameter model based on stochastic fractional harmonic oscillator for neural signals. The model computes maximum human lifespan using 1/f slope, the measure of neural power decay with frequency, which is indicative of neural noise. Using slope rate from electroencephalographic and electrocorticographic datasets, we estimate the mean lifetimes of healthy adults and epileptic patients as 76.9 and 69.7 years, resulting in 89.4% and 96.9% accuracy respectively. Additionally, the present model resolves the inconsistency in age-related changes of fractal dimension (FD) and captures naturally the non-monotonic variation of stimulus-induced gamma power. Thus, the present model provides a simple way to estimate lifespan while explaining age-related changes in slope, FD and power simultaneously, thereby, paving the way for individualized lifetime measurements and unveiling fundamental principles governing life.
Longevity Relevance Analysis
(4)
The paper claims to provide a model for estimating human lifespan based on neural signals and their characteristics. This research is relevant as it attempts to address the prediction of human lifespan, which is a fundamental aspect of understanding aging and longevity.
Jizong Jiang, Yongjun Zheng, Rui Wang ...
· Chinese medical journal
· Cardiac Regeneration and Ageing Lab, Institute of Geriatrics (Shanghai University), Affiliated Nantong Hospital of Shanghai University (The Sixth People's Hospital of Nantong), School of Medicine, Shanghai University, Jiangsu province, Nantong 226011, China.
· pubmed
Aging is an inevitable, physiological process of the human body, leading to deterioration in bodily function and increased susceptibility to various diseases. Effective endogenous therapeutic strategies for anti-aging and related diseases remain limited. Exercise confers multifac...
Aging is an inevitable, physiological process of the human body, leading to deterioration in bodily function and increased susceptibility to various diseases. Effective endogenous therapeutic strategies for anti-aging and related diseases remain limited. Exercise confers multifaceted benefits to physical health by augmenting osteogenic and myogenic processes, enhancing cardiovascular and nervous system function, and attenuating chronic inflammation. Angiogenesis and lymphangiogenesis play pivotal roles in anti-aging, tissue repair, and immune response modulation, underscoring their potential as therapeutic targets for age-related diseases. Modulating angiogenic and lymphangiogenic pathways may provide a promising strategy for mitigating vascular decline and immune system dysfunction associated with aging. Exercise-induced endogenous angiogenesis and lymphangiogenesis can exert beneficial effects on physiological function, thereby representing a potential therapeutic paradigm for combating age-related decline and diseases. This review offers a thorough summary of the present knowledge regarding angiogenesis and lymphangiogenesis induced by exercise, encompassing the underlying mechanisms and the effects in different organs. In addition, it explores the potential of physical activity as a non-pharmacological intervention for anti-aging strategies and disease management, offering novel insights into the intersection of physical activity, aging, and disease progression.
Longevity Relevance Analysis
(4)
Exercise-induced angiogenesis and lymphangiogenesis may serve as a therapeutic strategy to combat aging and related diseases. The paper discusses mechanisms that could address the root causes of aging through exercise, making it relevant to longevity research.
Qi Yang, Yue Hu, Bing Zhang ...
· International journal of sports medicine
· School of Physical Education and Sports Training, Hunan Sports Vocational College, Changsha, China.
· pubmed
Aging is a complex biological process driven by the dynamic interplay among genetic, environmental, and lifestyle factors. Advances in epigenetics have significantly deepened our understanding of the molecular mechanisms underlying aging, underscoring the critical roles of revers...
Aging is a complex biological process driven by the dynamic interplay among genetic, environmental, and lifestyle factors. Advances in epigenetics have significantly deepened our understanding of the molecular mechanisms underlying aging, underscoring the critical roles of reversible modifications such as DNA methylation, histone modifications, and non-coding RNA regulation. Emerging evidence suggests that exercise is a potent modulator of these epigenetic processes, capable of reshaping the epigenetic landscape to restore cellular homeostasis, modulate gene expression, and enhance physiological resilience. This review systematically synthesizes current knowledge on how exercise modulates epigenetic mechanisms implicated in aging and delineates the distinct epigenetic adaptations induced by variations in exercise modality, intensity, and duration. By integrating these molecular insights, this review provides a comprehensive mechanistic framework linking exercise-induced epigenetic remodeling to healthy aging, and underscores exercise as a promising intervention to counteract aging-related functional decline and disease progression.
Longevity Relevance Analysis
(4)
Exercise induces epigenetic modifications that can enhance physiological resilience and promote healthy aging. The paper is relevant as it addresses the molecular mechanisms of aging and suggests exercise as a potential intervention to mitigate aging-related decline, focusing on root causes rather than merely treating symptoms.
McColl, T. J., Moore, D. R., Emberly, E. ...
· systems biology
· Simon Fraser University
· biorxiv
Background: Sarcopenia is the progressive loss of skeletal muscle mass, strength, and function with age, driven by dysregulation in the rates of muscle protein synthesis (MPS) and breakdown (MPB). Although MPB contributes to net protein balance (NB), a primary contributor of sarc...
Background: Sarcopenia is the progressive loss of skeletal muscle mass, strength, and function with age, driven by dysregulation in the rates of muscle protein synthesis (MPS) and breakdown (MPB). Although MPB contributes to net protein balance (NB), a primary contributor of sarcopenia is anabolic resistance, defined as the blunted MPS response to anabolic stimuli such as feeding. While candidate mechanisms of anabolic resistance have been identified, none singularly explains the reduction in MPS. Instead, multiple mechanisms likely act simultaneously and interactively to suppress MPS. Studying these interactions experimentally is challenging. Alternatively, mathematical modeling is well suited to analyzing complex biological phenomena such as anabolic resistance. Methods: We analyzed a previously developed kinetic model of leucine-mediated signaling and protein metabolism in human skeletal muscle to systematically investigate potential mechanisms contributing to anabolic resistance. A global sensitivity analysis identified key controllers of MPS, MPB, and NB. We then simulated an essential amino acid feeding intervention in older adults, classified the responses as either anabolic sensitive or resistant, and compared the resulting parameter distributions of the two groups. A targeted analysis evaluated the effects of individual and combined dysregulated putative mechanisms of anabolic resistance on muscle metabolism. Finally, we simulated therapeutic interventions aimed at restoring muscle metabolism. Results: Sensitivity analysis revealed that MPS and MPB are primarily controlled by their proximal signaling controllers, while NB is largely driven by MPS dynamics. Exploratory simulations showed that several parameters and signaling protein concentrations, particularly those controlling MPS, differed significantly between anabolic sensitive and resistant groups. Targeted simulations indicated that multiple dysregulated mechanisms were required to account for the experimentally observed reductions in MPS in older adults. Therapeutic simulations showed that while single-target interventions could largely restore MPS when isolated mechanisms were perturbed (e.g., enhancing p70S6K levels, increasing mTORC1 sensitivity), a multifactorial approach was required to recover muscle metabolism when all anabolic resistance mechanisms were present. Conclusion: This study demonstrates the multifactorial nature of anabolic resistance. We provide a framework for the experimental manipulation of independent and related factors that could underpin age-related anabolic resistance. The results motivate new hypotheses regarding the mechanisms most likely to be impaired and support the development of multi-target therapeutic strategies to help restore muscle protein metabolism in aging.
Longevity Relevance Analysis
(4)
The paper claims that multiple dysregulated mechanisms contribute to anabolic resistance in aging, necessitating multifactorial therapeutic strategies to restore muscle metabolism. This research addresses a fundamental aspect of aging—anabolic resistance—which is a significant barrier to maintaining muscle health in older adults, thus contributing to the understanding of age-related decline in muscle function.
Shengzi Jin, Xingyao Liu, Yingce Zheng ...
· Food & function
· College of Veterinary Medicine, Northeast Agricultural University, Harbin 150030, P. R. China. liuyun@neau.edu.cn.
· pubmed
Postmenopausal women face an elevated risk of osteoporosis due to decreased estradiol secretion. Obesity is also a prevalent disease during menopause, but the impact on bone health is understudied. Genistein (GEN) is a soy-derived isoflavone that has beneficial effects on a varie...
Postmenopausal women face an elevated risk of osteoporosis due to decreased estradiol secretion. Obesity is also a prevalent disease during menopause, but the impact on bone health is understudied. Genistein (GEN) is a soy-derived isoflavone that has beneficial effects on a variety of age-related diseases, but the exact role of GEN in bone health in hypoestrogenism and obesity-induced stress remains to be elucidated. This study employed an ovariectomized (OVX) mouse model subjected to a high-fat diet to simulate postmenopausal obesity and investigate the effects of GEN intake on bone metabolism. Bone mass alterations and metabolic function were evaluated using micro-CT imaging, biochemical markers, and histopathological staining. The homeostasis of the bone matrix was further assessed through primary bone marrow cell differentiation assays, western blotting, and quantitative real-time PCR (qRT-PCR). Additionally, intestinal barrier protein expression, 16S rRNA gene sequencing, and untargeted metabolomics were integrated to examine GEN's impact on gut structure, microbiota composition, and fecal metabolic profiles. Our findings indicated that diet-induced obesity (DIO) exacerbated OVX-induced osteopenia in mice, whereas GEN supplementation significantly mitigated bone loss and restored balanced differentiation among osteoblasts, adipocytes, and osteoclasts. Furthermore, GEN improved metabolic abnormalities associated with obesity. It also preserved intestinal barrier integrity by maintaining tight junction proteins and mucus levels, thereby reducing systemic inflammation. The results of 16s rDNA gene sequencing showed that GEN alleviated intestinal microbiota dysbiosis and increased the abundance of beneficial bacteria
Longevity Relevance Analysis
(4)
Genistein supplementation mitigates bone loss and improves metabolic abnormalities in a mouse model of postmenopausal obesity. The study addresses the interplay between gut microbiota, obesity, and bone health, which are critical factors in aging and age-related diseases.
Zhen Qi, Xi Liu, Yifen Chen ...
· Molecular and cellular biology
· Key Laboratory of Chemical Biology of Fujian Province, Department of Chemical Biology, College of Chemistry and Chemical Engineering,Xiamen University, Xiamen, China.
· pubmed
Lactate, historically considered a metabolic byproduct, has emerged as a key regulator of muscle physiology and metabolism. This study explores its potential as an exercise mimetic to counteract disuse muscle atrophy (DMA) in aging skeletal muscle using a hindlimb suspension mode...
Lactate, historically considered a metabolic byproduct, has emerged as a key regulator of muscle physiology and metabolism. This study explores its potential as an exercise mimetic to counteract disuse muscle atrophy (DMA) in aging skeletal muscle using a hindlimb suspension model in senescence-accelerated prone 8 (SAMP8) mice. The mice were divided into four groups: Control, lactate-treated control, hindlimb suspension, and hindlimb suspension with lactate intervention. Lactate administration preserved gastrocnemius muscle mass, restored muscle strength, and attenuated oxidative fiber atrophy. Electrophoretic and histological analyses showed increased MyHC I expression, indicating protection of oxidative fibers. Functional assessments revealed improved muscle endurance and contractile force, while metabolomic profiling identified changes in energy metabolism, amino acid metabolism, and protein synthesis pathways. Specifically, lactate improved impaired branched-chain amino acid metabolism, suggesting enhanced protein synthesis. In addition, lactate boosted Cori cycle activity, upregulated hepatic lactate transporters, and increased lactate dehydrogenase B activity, facilitating efficient lactate metabolism and gluconeogenesis. These results provide new insights into the role of lactate as a metabolic regulator and highlight its potential as a therapeutic intervention to combat exercise-induced muscle wasting and preserve muscle function in aging and immobilized individuals.
Longevity Relevance Analysis
(4)
Lactate administration mitigates disuse muscle atrophy and improves muscle endurance in aging mice. The study addresses the underlying mechanisms of muscle deterioration associated with aging and disuse, suggesting a potential therapeutic approach to enhance muscle function in older individuals.
Tanvi T Patel, Rileigh Rubar, Vince G Amoroso ...
· GeroScience
· Dept of Biological Sciences, University of Illinois, 845 W Taylor St., Chicago, IL, 60607, USA.
· pubmed
Naked mole-rats (NMR, Heterocephalus glaber) defy Gompertzian rules of mortality and age-dependent senescence to lead healthy lives well into their fourth decade. The NMR immune system likely contributes to this phenotype by protecting against infections, regulating tissue repair...
Naked mole-rats (NMR, Heterocephalus glaber) defy Gompertzian rules of mortality and age-dependent senescence to lead healthy lives well into their fourth decade. The NMR immune system likely contributes to this phenotype by protecting against infections, regulating tissue repair, and eradicating neoplastic cells. In keeping with their many other paedomorphic traits, adult NMRs retain functional thymic tissue in the submandibular triangle. Despite this additional thymic tissue, perinatal NMR thymi are half the size of mouse thymi, yet both species show similar thymic involution trajectories. Smaller thymi may indicate less diverse thymocyte clonotypes that need to complete selection before being released as functional, self-tolerant T cells. Transcriptomic studies revealed that when compared with mice, NMRs have a larger myeloid to lymphoid ratio, lack natural killer (NK) cells, and that the αβ clonotypic diversity of NMR CD8 T cells is limited and smaller than that of their CD4 T cells. NMRs, strikingly, have a large circulating population of γδ T cells with two distinct subsets; one with a large diversity of γ and δ TCR loci and the other, a cytotoxic T cell subset with a dominant clonotype. Collectively, these data suggest that NMRs, living in a sealed milieu, rely more upon the innate immune response and have evolved under relaxed viral selective pressure. Rather, they have selected for an atypical myeloid-biased mode of innate immune surveillance and circulating populations of cytotoxic γδ T cells. In summary, the NMR appears to have been optimized to provide better immunosurveillance, tissue homeostasis, and protection against cancer rather than protection against unlikely environmental exposure to viral pathogens. These features likely contribute to their prolonged healthspan and exceptional longevity.
Longevity Relevance Analysis
(4)
The naked mole-rat's immune system has evolved to enhance immunosurveillance and tissue homeostasis, contributing to its exceptional longevity. This paper is relevant as it explores the unique immune adaptations of the naked mole-rat that may provide insights into mechanisms underlying longevity and healthy aging.
Yang, Y., Zhao, W., Mao, Y. ...
· neuroscience
· Penn State University
· biorxiv
Infra-slow (< 0.1 Hz) global brain activity, quantified by the global mean BOLD (gBOLD) signal in resting-state fMRI, is elevated during sleep and closely associated with cerebrospinal fluid (CSF) dynamics, a key mechanism for the brain waste clearance implicated in neurodegenera...
Infra-slow (< 0.1 Hz) global brain activity, quantified by the global mean BOLD (gBOLD) signal in resting-state fMRI, is elevated during sleep and closely associated with cerebrospinal fluid (CSF) dynamics, a key mechanism for the brain waste clearance implicated in neurodegenerative disorders such as Alzheimer\'s disease (AD). However, the effect of sleep deprivation on gBOLD activity and its interaction with aging remain poorly understood. Using a rigorously controlled in-laboratory total sleep deprivation (TSD) protocol, we demonstrate that TSD significantly increases both the amplitude of the gBOLD signal and its coupling with CSF flow, suggesting a compensatory mechanism that may enhance glymphatic clearance following acute sleep loss. Notably, these TSD-induced enhancements exhibit robust age dependency, with diminished responses in individuals at midlife (40-50 yrs). The absence of this compensatory mechanism in these midlife participants may exacerbate age-related impairments in neurotoxic clearance and increase dementia susceptibility, thereby offering mechanistic insights into the nexus between sleep disruption, aging, and neurodegeneration.
Longevity Relevance Analysis
(4)
Sleep deprivation increases gBOLD signal amplitude and CSF coupling, with age-dependent effects that may influence neurodegenerative disease susceptibility. The study addresses the interaction between sleep, aging, and neurodegeneration, which is crucial for understanding mechanisms that could contribute to longevity and age-related disease prevention.
Shea, A., Sun, S., Kennedy, J. ...
· genomics
· University of Minnesota
· biorxiv
Recent advances in ultra-accurate sequencing technologies have revealed that somatic mutations accumulate across the human lifespan and may contribute to both normal aging and disease. These mutations are highly diverse, often non-recurrent, and functionally heterogeneous, which ...
Recent advances in ultra-accurate sequencing technologies have revealed that somatic mutations accumulate across the human lifespan and may contribute to both normal aging and disease. These mutations are highly diverse, often non-recurrent, and functionally heterogeneous, which makes their biological impact difficult to evaluate systematically. Although many studies have profiled somatic mutations in individual tissues or limited cohorts, a centralized and scalable platform that integrates discoveries and supports functional interpretation has been lacking. To address this gap, we present SomaMutDB 2.0 (https://somamutdb.org/SomaMutDB/), a substantially expanded database that catalogs 8.9 million mutations (8.57 million SNVs and 0.29 million INDELs) from 10,852 samples of 607 human subjects across 47 studies. Beyond expanded data coverage, SomaMutDB 2.0 introduces a comprehensive functional annotation framework that applies 22 predictive models, encompassing coding, regulatory, expression-based, and ensemble predictors, to systematically assess mutational impact. Users can browse pre-annotated variants through an interactive interface or upload their own variants for real-time analysis, with results contextualized against all mutations from normal, non-diseased tissues in the database. Together, these advances establish SomaMutDB 2.0 as the most comprehensive resource currently available for characterizing somatic mosaicism and functional interpretation in human health and aging.
Longevity Relevance Analysis
(4)
SomaMutDB 2.0 provides a comprehensive database for analyzing somatic mutations and their functional impact in normal human tissues. The paper is relevant as it addresses the accumulation of somatic mutations over the human lifespan, which may contribute to aging and age-related diseases, thus providing insights into the biological mechanisms underlying aging.
Monti, S., Lustgarten, M. S., Huang, Z. ...
· systems biology
· Boston University
· biorxiv
The New England Centenarian Study (NECS) provides a unique resource for the study of extreme human longevity (EL). To gain insight into biological pathways related to EL, chronological age and survival, we used an untargeted serum metabolomic approach (> 1,400 metabolites) in 213...
The New England Centenarian Study (NECS) provides a unique resource for the study of extreme human longevity (EL). To gain insight into biological pathways related to EL, chronological age and survival, we used an untargeted serum metabolomic approach (> 1,400 metabolites) in 213 NECS participants, followed by integration of our findings with metabolomic data from four additional studies. Compared to their offspring and matched controls, EL individuals exhibited a distinct metabolic profile characterized by higher levels of primary and secondary bile acids - most notably chenodeoxycholic acid (CDCA) and lithocholic acid (LCA) - higher levels of biliverdin and bilirubin, and stable levels of selected steroids. Notably, elevated levels of both bile acids and steroids were associated with lower mortality. Several metabolites associated with age and survival were inversely associated with metabolite ratios related to NAD+ production and/or levels (tryptophan/kynurenine, cortisone/cortisol), gut bacterial metabolism (ergothioneine/ trimethylamine N-oxide, aspartate/quinolinate), and oxidative stress (methionine/methionine sulfoxide), implicating these pathways in aging and/or longevity. We further developed a metabolomic clock predictive of biological age, with age deviations significantly associated with mortality risk. Key metabolites predictive of biological aging, such as taurine and citrate, were not captured by traditional age analyses, pointing to their potential role as biomarkers for healthy aging. These results highlight metabolic pathways that may be targeted to promote metabolic resilience and healthy aging.
Longevity Relevance Analysis
(5)
The paper identifies distinct metabolomic profiles associated with extreme longevity and proposes potential biomarkers for healthy aging. This research is relevant as it explores biological pathways related to aging and longevity, aiming to uncover mechanisms that could promote metabolic resilience and healthy aging.
Nandi, S., Cheng, Y., Al-Azzam, S. ...
· genomics
· UC San Diego
· biorxiv
Ultra-accurate detection of rare somatic mutations is critical for understanding mutational processes in human disease, aging, and environmental exposures, yet current methods are limited by error rates, restricted genome coverage, and high DNA input. We present UDSeq, a duplex s...
Ultra-accurate detection of rare somatic mutations is critical for understanding mutational processes in human disease, aging, and environmental exposures, yet current methods are limited by error rates, restricted genome coverage, and high DNA input. We present UDSeq, a duplex sequencing protocol combining random fragmentation, efficient UMI ligation, and quantitative input control to achieve near-complete genome/exome representation from as little as 100 pg DNA. Benchmarking in human sperm estimates a UDSeq error rate of ~2.5x10^-9 per base pair. UDSeq captures mutational signatures from heterogeneous populations without clonal expansion, reproduces exposure-specific patterns in cell lines and rodent models, and enables cross-species profiling. Compared with prior duplex methods, UDSeq yields up to fourfold more usable duplex molecules, improves library conversion, and remains cost-effective. We include a step-by-step protocol with quality-control checkpoints for fragment size, ligation yield, library conversion, and duplication rate. UDSeq provides a scalable, low-input platform for accurate profiling of somatic mutagenesis.
Longevity Relevance Analysis
(4)
UDSeq is a novel duplex sequencing protocol that significantly improves the detection of rare somatic mutations. The paper is relevant as it addresses the underlying mutational processes that contribute to aging and age-related diseases, potentially providing insights into the mechanisms of somatic mutagenesis in the context of longevity research.
Songfeng Chen, Hao Han, Yuhao Zhang ...
· Advanced science (Weinheim, Baden-Wurttemberg, Germany)
· The First Affiliated Hospital of Zhengzhou University, Zhengzhou, 45000, China.
· pubmed
Intervertebral disc degeneration (IVDD) is a multifactorial pathology primarily driven by the senescence of nucleus pulposus cells (NPC), inflammatory microenvironment of extracellular matrix (ECM), and the resultant decline in NPCs viability. Conventional treatment strategies of...
Intervertebral disc degeneration (IVDD) is a multifactorial pathology primarily driven by the senescence of nucleus pulposus cells (NPC), inflammatory microenvironment of extracellular matrix (ECM), and the resultant decline in NPCs viability. Conventional treatment strategies often fail to address these two interconnected factors simultaneously. To overcome this limitation, a bifunctional anti-swelling hydrogel system encapsulating anti-senescence drugs quercetin (Q) and dasatinib (D), as well as nucleus pulposus-derived exosomes (NP-Exo) is developed. This system is designed to clear senescent NPCs, regulate the inflammatory disc microenvironment, and enhance NPC activity, thereby significantly improving treatment efficacy. Mechanistically, this strategy helps preserve mitochondrial function, maintain mitochondrial membrane potential, and reduce excessive reactive oxygen species production, which collectively contribute to delaying cellular senescence and restoring disc homeostasis. Additionally, the anti-swelling property of the hydrogel can alleviate structural displacement caused by swelling, further optimizing the stability and efficacy of the treatment. The biological efficacy of this system is validated in both rat and goat models. The experimental results demonstrated that this drug delivery system can effectively restore the integrity of the ECM, ultimately promoting the repair of IVDD. These findings highlight the platform's potential for IVDD treatment, offering a novel therapeutic strategy for IVDD repair.
Longevity Relevance Analysis
(4)
The paper claims that a bifunctional anti-swelling hydrogel system can effectively repair intervertebral disc degeneration by clearing senescent nucleus pulposus cells and regulating the inflammatory microenvironment. This research is relevant as it addresses the senescence of cells, a fundamental aspect of aging, and proposes a novel therapeutic strategy that could potentially mitigate age-related degeneration in intervertebral discs.
Michael Zelko, Danyan Li, Sudheesh Allikka Parambil ...
· Development (Cambridge, England)
· Department of Molecular Cellular and Developmental Biology, Yale University, New Haven CT 06511, USA.
· pubmed
Planarians have proficient regenerative abilities that persist undiminished throughout adulthood, mediated by their stem cells (neoblasts). It is unclear how planarians accomplish this, as most animals show age-related declines in health and regeneration. Neoblasts express the co...
Planarians have proficient regenerative abilities that persist undiminished throughout adulthood, mediated by their stem cells (neoblasts). It is unclear how planarians accomplish this, as most animals show age-related declines in health and regeneration. Neoblasts express the conserved RNA regulatory PIWI protein SMEDWI-1, homologs of which are found in germ cells and long-lived cells in other systems. We previously found that loss of SMEDWI-1 from the neoblasts results in accumulation of non-coding and aberrant RNAs. Here, we report that over time SMEDWI-1-depleted animals develop defects in wound repair and regeneration, alterations in secreted proteins, and increased intracellular protein aggregation. Our data indicate that these defects result from misassembly of the Signal Recognition Particle (SRP), a ribonucleoprotein (RNP) responsible for co-translational protein secretion, that contains a non-coding RNA as a scaffold. In the absence of tight regulation of non-coding RNA as provided by SMEDWI-1, gradual accumulation of RNAs leads to imbalances in essential cellular machinery such as the SRP, resulting in compromised proteostasis and progressive loss of organismal vigor.
Longevity Relevance Analysis
(4)
The paper claims that the depletion of the RNA regulatory protein SMEDWI-1 in planarian neoblasts leads to defects in regeneration due to compromised proteostasis. This research is relevant as it explores the mechanisms underlying regenerative abilities and cellular maintenance, which are crucial for understanding longevity and age-related decline.
Piotr Rzymski, Barbara Poniedziałek, Dorota Zarębska-Michaluk ...
· Journal of virology
· Department of Environmental Medicine, Poznan University of Medical Sciences, Poznań, Poland.
· pubmed
Despite widespread seropositivity, respiratory syncytial virus (RSV) remains a major cause of severe illness in adults aged 60 years and older. This review examines why infection-acquired immunity fails to protect this group, focusing on four key factors: structural lung decline,...
Despite widespread seropositivity, respiratory syncytial virus (RSV) remains a major cause of severe illness in adults aged 60 years and older. This review examines why infection-acquired immunity fails to protect this group, focusing on four key factors: structural lung decline, comorbidities, immunosenescence, and impaired antibody responses. Age-related changes weaken mechanical defenses and antiviral immunity, while chronic diseases amplify RSV risk. Critically, repeated RSV infections may preferentially boost non-neutralizing antibodies targeting the postfusion F protein, limiting protection and possibly enhancing disease. The review also highlights how newly approved vaccines, based on stabilized prefusion F protein, can overcome these barriers by inducing strong neutralizing responses, offering a targeted strategy to reduce RSV burden in older adults.
Longevity Relevance Analysis
(4)
Older adults are more prone to respiratory syncytial virus due to factors like structural lung decline and immunosenescence, which limit effective immunity. The paper is relevant as it addresses age-related vulnerabilities and explores potential interventions to improve health outcomes in older adults, aligning with longevity research goals.
Thuy Quynh Nhu Nguyen, Ai-Han Nguyen, Manh Quoc Dao ...
· Acute Kidney Injury
· Department of Biochemistry, School of Medicine, Keimyung University, Daegu, South Korea.
· pubmed
An unexpected senotherapeutic function of heat shock protein 90 (HSP90) inhibitors-drugs long developed as cancer therapeutics-has recently been revealed. In this study, we employed an HSP90-specific inhibitor, PSY-2-12 (PSY), to explore its potential therapeutic application as a...
An unexpected senotherapeutic function of heat shock protein 90 (HSP90) inhibitors-drugs long developed as cancer therapeutics-has recently been revealed. In this study, we employed an HSP90-specific inhibitor, PSY-2-12 (PSY), to explore its potential therapeutic application as a senomorphic agent. We demonstrated that PSY, at non-toxic concentrations, reduces cellular senescence in both cisplatin (CP)-induced senescent kidney proximal tubular cells and angiotensin II-induced senescent human umbilical vein endothelial cells. The anti-senescent effect of PSY was further confirmed in a mouse model of CP-induced acute kidney injury (AKI). PSY treatment attenuated CP-induced kidney injury, as evidenced by decreased levels of urea, creatinine, and kidney injury molecule-1, and ameliorated CP-induced senescence, as shown by reduced β-galactosidase staining and p16 expression, along with increased lamin B1 levels compared with controls. Mechanistically, we found that PSY exerts its senotherapeutic effects through beclin-1-mediated stimulation of autophagy. PSY enhanced beclin-1 expression and autophagic flux in CP-treated proximal tubular cells, while inhibition of autophagy reversed the senotherapeutic effects of PSY. Similarly, beclin-1 knockdown abolished the protective effects. In summary, our results suggest that PSY, an HSP90-specific inhibitor, may serve as a promising senomorphic therapeutic agent for the treatment of AKI.
Longevity Relevance Analysis
(4)
The paper claims that the HSP90-specific inhibitor PSY-2-12 reduces cellular senescence and ameliorates acute kidney injury through autophagy activation. This research is relevant as it explores a potential therapeutic approach targeting cellular senescence, which is a key contributor to aging and age-related diseases.
Xinyu Zhu, Huihui Li, Tingting Xue ...
· Apoptosis : an international journal on programmed cell death
· Department of Clinical Laboratory of Shanxi Provincial People's Hospital, Shanxi Medical University, Taiyuan, 030012, China.
· pubmed
Ovarian aging is one of the common diseases in the female reproductive system. It is characterized by complex etiologies, involving multiple factors such as genetics, environment, metabolism, and cellular stress. In recent years, autophagy, a crucial cellular self-degradation and...
Ovarian aging is one of the common diseases in the female reproductive system. It is characterized by complex etiologies, involving multiple factors such as genetics, environment, metabolism, and cellular stress. In recent years, autophagy, a crucial cellular self-degradation and repair mechanism, has received substantial attention for its role in maintaining and deteriorating ovarian function. This review systematically summarizes the molecular mechanisms of autophagy and its regulation, as well as the latest research progress of macroautophagy, chaperone-mediated autophagy (CMA) and mitophagy in ovarian aging. Studies have shown that dysregulation of autophagic pathways is closely associated with decreased oocyte quality and reduced ovarian reserve function. Additionally, signaling pathways such as PI3K, AMPK, and mTOR participate in the process of ovarian aging by regulating autophagic activity. Although numerous studies have revealed the critical role of autophagy in ovarian aging, many issues remain to be resolved, such as the crosstalk mechanisms between different autophagic pathways and the precise spatiotemporal dynamics of the autophagic regulatory network. A deep understanding of the regulatory network of multi-pathway autophagy will provide new insights for developing intervention strategies to delay ovarian aging, holding significant scientific and clinical application value.
Longevity Relevance Analysis
(4)
The paper claims that dysregulation of autophagic pathways is closely associated with decreased oocyte quality and reduced ovarian reserve function. This research is relevant as it explores the mechanisms of ovarian aging, which is a fundamental aspect of female reproductive aging and could contribute to understanding and potentially mitigating age-related decline in reproductive health.
Raúl Sánchez-Vázquez, Sonia Burgaz García-Oteyza, Rosa Serrano ...
· Telomere-Binding Proteins
· Telomeres and Telomerase Group, Molecular Oncology Program, Spanish National Research Cancer Centre (CNIO), Madrid E-28029, Spain.
· pubmed
Pulmonary fibrosis is a lethal disease associated with damaging insults to the lung and with organismal aging. The presence of short and dysfunctional telomeres has been placed at the origin of this disease in a percentage of both familial and sporadic cases. Recently, a mutation...
Pulmonary fibrosis is a lethal disease associated with damaging insults to the lung and with organismal aging. The presence of short and dysfunctional telomeres has been placed at the origin of this disease in a percentage of both familial and sporadic cases. Recently, a mutation in the telomere-binding protein
Longevity Relevance Analysis
(4)
The paper claims that mice with a specific human mutation exhibit a phenotype similar to telomerase deficiency, leading to telomere shortening across generations. This research is relevant as it explores the connection between telomere dysfunction and pulmonary fibrosis, potentially addressing underlying mechanisms of aging and age-related diseases.
Lei, Y., Chen, Y., Guo, M. ...
· neuroscience
· Augusta University
· biorxiv
Epigenetic regulation is a key determinant of the aging process, and its dysregulation contributes to cognitive aging and increased vulnerability to Alzheimer's disease (AD). As major regulators of epigenetic processes, histone deacetylases (HDACs) have emerged as potential thera...
Epigenetic regulation is a key determinant of the aging process, and its dysregulation contributes to cognitive aging and increased vulnerability to Alzheimer's disease (AD). As major regulators of epigenetic processes, histone deacetylases (HDACs) have emerged as potential therapeutic targets for cognitive enhancement in neurodegenerative diseases. However, the distinct roles of individual HDAC isoforms remain to be defined. Here, we report that HDAC9 is specifically expressed in neurons of human and mouse brains, and its expression declines with age. HDAC9 deficiency impairs cognitive function and synaptic plasticity in young mice. Selective deletion of HDAC9 in hippocampal CA1 neurons also induces cognitive impairment. In contrast, overexpression of HDAC9 in forebrain glutamatergic neurons preserves cognitive function in aged mice. Moreover, HDAC9 is also downregulated in the brain of AD mouse models, whereas neuronal overexpression of HDAC9 alleviates AD-related cognitive and synaptic deficits and reduces A{beta} deposition. Together, these findings suggest neuronal HDAC9 is necessary and sufficient for maintaining cognitive and synaptic functions in the context of aging and AD.
Longevity Relevance Analysis
(4)
Neuronal HDAC9 is necessary for maintaining cognitive and synaptic functions in aging and Alzheimer's disease. The paper addresses the role of HDAC9 in cognitive aging and its potential as a therapeutic target, which aligns with efforts to understand and mitigate the root causes of aging-related cognitive decline.
Yabushita, T., Tanaka, Y., Fukushima, T. ...
· cell biology
· The Institute of Medical Science, The University of Tokyo
· biorxiv
Long-term hematopoietic stem cells (HSCs) possess the capacity to generate all blood lineages, yet they normally remain quiescent and become activated only in response to acute stress. We previously demonstrated that quiescent HSCs exhibit heterogeneity in intracellular calcium; ...
Long-term hematopoietic stem cells (HSCs) possess the capacity to generate all blood lineages, yet they normally remain quiescent and become activated only in response to acute stress. We previously demonstrated that quiescent HSCs exhibit heterogeneity in intracellular calcium; however the mechanisms that establish this heterogeneity and its physiological relevance remain unclear. Here, we identify phospholipase C like 1 (Plcl1), a non-catalytic protein that binds inositol 1,4,5-trisphosphate (IP), as being specifically enriched in the most quiescent HSC subset. Loss-of-function studies demonstrated that, at steady state, Plcl1 deficiency lowers basal intracellular calcium and shifts the HSC compartment toward CD41 subsets, while preserving overall HSC numbers and long-term reconstitution capacity. Under acute hematopoietic stress, Plcl1 loss accelerated and amplified platelet rebound and expansion of non-canonical megakaryocyte progenitors (ncMkPs), suggestive of activation of the thrombopoietic bypass pathway. In aging HSCs, Plcl1 deficiency exacerbated hallmark features, such as expansion of the phenotypic HSC pool, accumulation of CD41 HSCs and ncMkPs, and myeloid-skewed differentiation with impaired competitive reconstitution. These alterations were accompanied by reduced induction of calcium-responsive immediate-early genes. Collectively, these findings identify Plcl1 as an intrinsic regulator that stabilizes cytosolic calcium dynamics in HSCs, thereby restraining stress- and aging-associated megakaryocytic priming and preserving HSC function.
Longevity Relevance Analysis
(4)
Plcl1 regulates calcium dynamics in hematopoietic stem cells, influencing their function during aging and stress. The study addresses mechanisms underlying HSC function in aging, which is pertinent to understanding the biological processes of aging and potential interventions.
M Chandhru, Karthikeyan Ramamurthy, Gokul Sudhakaran ...
· RNA, Long Noncoding
· Toxicology and Pharmacology Laboratory, Department of Biotechnology, SRM Institute of Science and Technology, Faculty of Science and Humanities, Kattankulatur, 603203, Chengalpattu District, Tamil Nadu, India.
· pubmed
Hypertension is a complex, age-related condition that markedly elevates the risk of cardiovascular problems and mortality globally. With the aging global population, understanding the molecular foundations of hypertension is essential. Emerging evidence highlights the essential r...
Hypertension is a complex, age-related condition that markedly elevates the risk of cardiovascular problems and mortality globally. With the aging global population, understanding the molecular foundations of hypertension is essential. Emerging evidence highlights the essential roles of non-coding RNAs, particularly Long non-coding RNAs and microRNAs, in regulating gene expression linked to vascular health and blood pressure control. This review examines the impact of aging on the expression and synthesis of key ncRNAs, which leads to malfunction in three pivotal systems: vascular smooth muscle cells, the renin-angiotensin-aldosterone system, and endothelial cells. Dysregulated ncRNAs impair nitric oxide bioavailability, enhance inflammation, and modify vascular tone, resulting in arterial stiffness and increased blood pressure. Crosstalk between lncRNAs and miRNAs, as exemplified by MALAT1-miR-145 and H19-let-7b, reveals a complex regulatory network that affects vascular remodeling and homeostasis. This review highlights new molecular targets for early diagnosis and therapeutic treatment of age-related hypertension, incorporating recent findings on miRNA and lncRNA interactions.
Longevity Relevance Analysis
(4)
Aging-related epigenetic instability in lncRNAs and miRNAs contributes to the development of hypertension. The paper is relevant as it explores the molecular mechanisms linking aging and hypertension, addressing potential root causes of age-related vascular dysfunction.
Jinlin Wu, Xi Mei, Yong Li ...
· 3 Biotech
· Department of Endocrinology and Metabolism, Chongqing Traditional Chinese Medicine Hospital, The First Affiliated Hospital of Chongqing University of Chinese Medicine, Chongqing, 400021 China.
· pubmed
Vascular aging was reported to be closely related to diabetes. This study investigates the inhibitory effects and mechanism of curcumin on diabetic vascular aging by regulating mitophagy through the PINK1 pathway. The diabetic rat model was established by feeding with a high-fat ...
Vascular aging was reported to be closely related to diabetes. This study investigates the inhibitory effects and mechanism of curcumin on diabetic vascular aging by regulating mitophagy through the PINK1 pathway. The diabetic rat model was established by feeding with a high-fat diet and intraperitoneal injection of streptozotocin (STZ), and treated with high-dose (200 mg/kg), low-dose (50 mg/kg) curcumin, or metformin (200 mg/kg), respectively. The role of mitophagy in high glucose (HG)-induced human aortic smooth muscle cells (HASMCs) aging in vitro were investigated. The results indicated that curcumin ameliorated weight loss and improved elevated blood glucose levels in diabetic rats. Curcumin also improved the vascular pathological changes of the common carotid artery, decreased the vascular interstitial collagen fiber and vascular calcium salt deposition, and improved vascular ultrastructure. Furthermore, curcumin significantly decreased ET-1, VCAM-1, and p16 expressions. In addition, curcumin increased the expression of LC3II/I, Beclin1, and PINK1 proteins, while decreasing p62 expression. High-dose curcumin could improve mitochondrial morphology and increase mitochondrial autophagy. Additionally, curcumin increased HASMCs viability and inhibited HG-induced vascular aging by promoting mitophagy in vitro. WB confirmed that LC3II/I, Beclin1, and PINK1 levels were increased, while p62 and p16 levels were decreased. The improvement effect of curcumin on vascular aging was reversed by the mitophagy inhibitor Mdivi-1 or PINK1 siRNA. In conclusion, curcumin alleviates vascular aging in diabetic rats and HG-induced senescence in HASMCs by enhancing mitochondrial autophagy. These results suggest that curcumin has therapeutic potential in alleviating diabetic vascular aging.
Longevity Relevance Analysis
(4)
Curcumin alleviates vascular aging in diabetic rats and high glucose-induced senescence in HASMCs by enhancing mitochondrial autophagy. The study addresses mechanisms related to aging, specifically focusing on mitophagy and its role in vascular aging, which are relevant to understanding and potentially mitigating age-related decline.
Boning Liu, Ying Wang, Xiaoqian Chu ...
· Epigenesis, Genetic
· Guangxi University of Chinese Medicine, Guangxi 530001, China.
· pubmed
The intestine is a vital organ of the digestive system, with its function largely reliant on the continuous regeneration of mucosal epithelial cells by healthy intestinal stem cells (ISCs). However, as we age, the regenerative potential of ISCs declines, primarily due to deleteri...
The intestine is a vital organ of the digestive system, with its function largely reliant on the continuous regeneration of mucosal epithelial cells by healthy intestinal stem cells (ISCs). However, as we age, the regenerative potential of ISCs declines, primarily due to deleterious aging processes, such as cellular senescence, which contribute to the development of various chronic gut diseases. A growing body of evidence indicates that both healthy ISCs, which maintain intestinal homeostasis, and aging-associated senescent ISCs are profoundly influenced by epigenetic mechanisms. At the molecular level, dynamic and often reversible epigenetic modifications including chromatin remodeling, histone modifications, DNA methylation, N6-methyladenosine (m
Longevity Relevance Analysis
(4)
The paper claims that epigenetic mechanisms significantly influence the regenerative potential of intestinal stem cells in the context of aging. This research is relevant as it addresses the underlying molecular mechanisms that contribute to the decline in stem cell function with age, which is a critical aspect of aging and longevity.
Ying Liu, Jingran Zeng, Xueyi Liu ...
· Ferroptosis
· Department of Plastic and Aesthetic Surgery, Second Affiliated Hospital of Harbin Medical University, Harbin, China.
· pubmed
Sebaceous glands synthesize and secrete sebum, forming a protective barrier on the skin. However, prolonged exposure to UV radiation leads to glandular atrophy and reduced sebum production. This study investigated the impact of UVB irradiation on sebocyte function and demonstrate...
Sebaceous glands synthesize and secrete sebum, forming a protective barrier on the skin. However, prolonged exposure to UV radiation leads to glandular atrophy and reduced sebum production. This study investigated the impact of UVB irradiation on sebocyte function and demonstrated that growth differentiation factor (GDF)-11 can attenuate UVB-induced damage. The findings indicate that cumulative UVB irradiation induces photoaging in sebocytes, characterized by impaired cellular function and up-regulation of cellular senescence markers, along with reduced GDF11 expression. Notably, GDF11 overexpression alleviated these adverse effects. Apoptosis assays revealed that photoaged sebaceous gland cells exhibited resistance to apoptosis. Transmission electron microscopy further identified features indicative of ferroptosis. UVB exposure led to increased intracellular reactive oxygen species, decreased expression of the ferroptosis-related protein glutathione peroxidase (GPX)-4, and elevated levels of long-chain fatty acid-CoA ligase (ACSL)-4 and nuclear receptor coactivator (NCOA)-4. Further experiments confirmed that GDF11 overexpression increased the percentage of apoptotic cells and down-regulated GPX4 and ACSL4 expression, whereas GDF11 knockdown produced the opposite effects. These results suggest that GDF11 mitigates sebocyte photoaging via the ferroptosis pathway and highlight its potential as a therapeutic target.
Longevity Relevance Analysis
(4)
GDF11 overexpression mitigates photoaging in sebocytes via the ferroptosis pathway. The study addresses mechanisms of cellular aging and potential therapeutic targets, contributing to understanding the biological processes underlying aging.
Milton Packer
· Signal Transduction
· Baylor Heart and Vascular Institute, Dallas, TX. Imperial College, London, UK.
· pubmed
Nutrient surplus sensing through PI3K (phosphoinositide-3-kinase) and mTOR (mechanistic target of rapamycin) stimulates anabolism to expand cellular mass, whereas nutrient and energy deprivation sensing through SIRT1 (sirtuin-1) and AMPK (adenosine monophosphate-activated protein...
Nutrient surplus sensing through PI3K (phosphoinositide-3-kinase) and mTOR (mechanistic target of rapamycin) stimulates anabolism to expand cellular mass, whereas nutrient and energy deprivation sensing through SIRT1 (sirtuin-1) and AMPK (adenosine monophosphate-activated protein kinase) promotes catabolism to support cytoprotective quiescence. By signaling through downstream effectors (PGC-1α [peroxisome proliferator-activated receptor gamma coactivator 1-alpha], PPARα/PPARγ, FoxO1 [forkhead box protein family O1], NRF2 [nuclear factor erythroid-derived factor 2], HIF-1α [hypoxia-inducible factor-1α], and HO-1 [heme oxygenase-1]), environmental nutrients, growth factors, and cellular stress influence mitochondrial biogenesis, autophagic flux, cardiac hypertrophy, and cardiomyocyte senescence and apoptosis. Despite these canonical descriptions, the actual response to each effector is determined by the intensity and duration of signaling. Typically, transient and measured signaling produces adaptive effects, whereas continuous heightened activity yields maladaptive responses. The effects of signaling are also influenced by context; ie, the nature and intermittency of the external stress and the characteristics of the underlying substrate (eg, cardiomyopathy, obesity, or aging). PI3K signaling promotes physiological hypertrophy and is cardioprotective during abrupt cardiac stress, but its sustained activation accelerates pathological hypertrophy related to obesity and aging. Signaling through SIRT1/AMPK (and upregulation of autophagic flux) exerts favorable effects during exercise training and in chronic cardiomyopathy, obesity, and aging, but it undermines the cardiac response to abrupt stress. Intermittent FoxO1 upregulation may promote physiological hypertrophy while antagonizing pathological hypertrophy, but prolonged activation leads to cardiomyocyte apoptosis. NRF2 exerts antioxidant effects when background autophagic flux is vigorous but aggravates cellular stress when autophagy is suppressed (as in pathological hypertrophy). Sustained activation of PPARγ, NRF2, and HIF-1α in nutrient surplus states can lead to maladaptive ventricular remodeling, thus explaining the results of clinical trials with thiazolidinediones, bardoxolone, and prolyl hydroxylase inhibitors. The influence of duration, intensity, and context may be mediated (in part) by the activation or suppression of counterregulatory mechanisms, by the selective recruitment of corepressors, and by posttranslational protein modifications. These observations, considered collectively, suggest that no protein or cellular process viewed in isolation can be regarded as cardioprotective or maladaptive. Cell signals operate usefully if they are delivered as part of an orchestrated program of compartmentalized nuanced bursts, acting as elements of multifaceted oscillating systems whose periodicity is determined by the need to achieve homeostasis.
Longevity Relevance Analysis
(4)
The paper claims that the intensity, duration, and context of nutrient signaling in the heart influence cardioprotection and maladaptive responses. This research is relevant as it explores the complex signaling pathways that could be targeted to mitigate age-related cardiac dysfunction and promote longevity through improved understanding of cellular processes.
Qi Guo, Zhenjiang Li, Cheng Luo ...
· iScience
· Department of Otolaryngology Head and Neck Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, China.
· pubmed
Age-related hearing loss (ARHL) is a major public health concern, driven by the interplay of multiple factors. Here, we reveal spatiotemporal metabolic shifts in murine inner ears mirroring erythrocytes and plasma. Isotope-labeled glucose tracing demonstrates a metabolic reroutin...
Age-related hearing loss (ARHL) is a major public health concern, driven by the interplay of multiple factors. Here, we reveal spatiotemporal metabolic shifts in murine inner ears mirroring erythrocytes and plasma. Isotope-labeled glucose tracing demonstrates a metabolic rerouting favoring glycolysis over the pentose phosphate pathway, alongside downregulation of the tricarboxylic acid cycle, indicating impaired energy production and redox homeostasis. Accumulation of medium- and long-chain acylcarnitines further exacerbates lipotoxicity. Notably, age-dependent depletion of arginine, lysine, proline, and glycine disrupts the arginine-polyamine-urea cycle. Translationally, UK Biobank plasma metabolomics links omega-6 fatty acids, linoleic acid, glycine, and albumin to ARHL resilience, while branched-chain amino acids, tyrosine, creatinine, glycoprotein acetyls and urea confer risk. Sex differences in ARHL were linked to fatty acid metabolism divergence. These bioenergetic disruptions in the inner ear are mirrored in erythrocytes and plasma, highlighting potential biomarkers for early ARHL diagnosis and treatment.
Longevity Relevance Analysis
(4)
The paper identifies metabolic shifts in the inner ear that may serve as early predictors for age-related hearing loss. This research addresses underlying metabolic changes associated with aging, contributing to the understanding of age-related diseases and potential biomarkers for early diagnosis.
Arian Daneshpour, Maria Eduarda Nastarino Leite, Karl-Heinz Wagner ...
· Selenium
· Universal Scientific Education and Research Network (USERN), Tehran, Iran; Digital Innovation and Lifestyle Interventions Network (DIAL_IN), Universal Scientific Education and Research Network (USERN), Iran. Electronic address: daneshpourarian@gmail.com.
· pubmed
Brain aging is accompanied by progressive cognitive decline and increased risk of neurodegenerative diseases, with adult hippocampal neurogenesis (AHN) playing a pivotal role in maintaining cognitive resilience. Selenium, an essential trace element, exerts significant neuroprotec...
Brain aging is accompanied by progressive cognitive decline and increased risk of neurodegenerative diseases, with adult hippocampal neurogenesis (AHN) playing a pivotal role in maintaining cognitive resilience. Selenium, an essential trace element, exerts significant neuroprotective and neurogenic effects predominantly through its incorporation into selenoproteins, which regulate oxidative stress, neuroinflammation, and synaptic plasticity. This review synthesizes recent advances delineating selenium's metabolism, bioavailability, and its multifaceted roles in brain development, function, and aging, emphasizing mechanisms underpinning hippocampal neurogenesis. Key molecular pathways influenced by selenium include phosphoinositide 3-kinase (PI3K)/protein kinase B (Akt)/Wingless/Integrated (Wnt) and brain-derived neurotrophic factor (BDNF)/tropomyosin receptor kinase B (TrkB) signaling pathways that promote neural progenitor cell proliferation and differentiation. Selenium transport via selenoprotein P and its receptor low-density lipoprotein receptor-related protein 8 (LRP8) is critical for adequate selenium delivery to the hippocampus to support neurogenesis, with exercise demonstrated to potentiate this axis. Selenium also mitigates ferroptosis, preserves mitochondrial integrity, and modulates neuroimmune interactions by attenuating microglial activation and inflammasome signaling, fostering a neurogenic environment. Emerging evidence highlights selenium's regulatory effects on RNA expression, including microRNAs modifications, further influencing neuronal health. Despite promising preclinical and observational data, clinical translation remains limited by heterogeneous and short-term studies. Future research priorities include multi-omics investigations, longitudinal cohorts, and addressing global selenium intake disparities through policy initiatives and precision nutrition. By consolidating mechanistic insights with clinical perspectives, this review underscores selenium's potential as a modifiable factor to enhance AHN and cognitive health, advocating for integrated translational strategies to combat brain aging and neurodegeneration.
Longevity Relevance Analysis
(4)
Selenium has neuroprotective effects that may enhance adult hippocampal neurogenesis and cognitive health in the context of brain aging. The paper addresses mechanisms that could potentially mitigate cognitive decline, which is a core aspect of aging research.
Maleah Fekete, Gabriele Ciciurkaite
· Stress, Psychological
· Irsay Institute for Sociomedical Sciences Research, Indiana University, United States. Electronic address: mafekete@iu.edu.
· pubmed
Adverse childhood experiences (ACEs) are linked to negative health outcomes, but research has not examined the extent to which stress proliferation-the tendency of initial stressors to beget subsequent stressors-explains their association with accelerated biological aging. Using ...
Adverse childhood experiences (ACEs) are linked to negative health outcomes, but research has not examined the extent to which stress proliferation-the tendency of initial stressors to beget subsequent stressors-explains their association with accelerated biological aging. Using data from 2201 adults in the Person-to-Person Health Interview Study (mean age = 50, SD = 18.6; 61% female; 85% White) and second- and third-generation epigenetic clocks (AgeAccelGrim2 and DunedinPACE), we test whether adult stressors mediate the relationship between ACEs and biological aging, distinguishing between stressful life events and chronic financial strain as pathways. Results show that greater exposure to ACEs is associated with accelerated biological aging both directly and indirectly. Causal mediation analyses indicate that chronic financial strain accounts for 50% of the ACEs-AgeAccelGrim2 association and 47% of the ACEs-DunedinPACE association, while discrete events account for 42% of the ACEs-AgeAccelGrim2 association (the pathway through discrete events is not significant for DunedinPACE). Findings suggest that stressors in adulthood, including financial strain as well as acute stressful experiences like getting divorce or being fired, may be an important pathway through which early adversity contributes to physiological aging.
Longevity Relevance Analysis
(4)
The paper claims that adult stressors, particularly chronic financial strain and acute stressful experiences, mediate the relationship between adverse childhood experiences and accelerated biological aging. This research is relevant as it explores the link between early life stress and physiological aging, addressing potential root causes of aging rather than merely treating age-related symptoms.