Aging has become an important public health concern with the accelerated aging of the global population. The rising impetus to extend lifespan as well as healthspan has drawn attention to the gut microbiome, an indispensable yet modifiable determinant of the aging process. This n...
Aging has become an important public health concern with the accelerated aging of the global population. The rising impetus to extend lifespan as well as healthspan has drawn attention to the gut microbiome, an indispensable yet modifiable determinant of the aging process. This narrative review addresses the complex interaction between the gut microbiome and aging, synthesizing findings in logical order. Evidence from model organisms supports the causal influence of gut microbes on host aging and longevity. Developmental evolution of the human gut microbiome throughout life stages reflects its adaptive nature affected by diet, lifestyle, hormone levels, and immune function, regulating aging through the gut-muscle and the gut-brain axes in late life. Signature characteristics of the long-lived gut microbiome, including increased diversity, elevated beneficial taxa, and enhanced gut homeostasis, lead to strategies to extend longevity. Intake of fiber, regular exercise, and pro-/pre-/postbiotic supplements are potential interventions on the gut microbiome to foster vitality in later years. Centering on these connected topics, this review identifies questions warranting investigation, with potential to improve therapeutic strategies for healthy aging.
Longevity Relevance Analysis
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The paper claims that the gut microbiome influences aging and longevity through various mechanisms. This is relevant as it explores the gut microbiome's role in the aging process, addressing potential interventions to promote healthy aging and longevity.
Qi Wang, Minyi Zhang, Weihao Jiang ...
· Oxidative Stress
· Department of Orthopedics, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, Shanghai, Huinan Town, Pudong, China.
· pubmed
Osteoarthritis (OA), a chronic and degenerative joint disease, has become increasingly prevalent due to the aging population, posing a significant societal burden. However, despite progress, effective therapeutic options for osteoarthritis remain limited. In OA, chronic inflammat...
Osteoarthritis (OA), a chronic and degenerative joint disease, has become increasingly prevalent due to the aging population, posing a significant societal burden. However, despite progress, effective therapeutic options for osteoarthritis remain limited. In OA, chronic inflammation mediates a hypoxic microenvironment, leading to increased cellular energy demands. Over time, this causes mitochondrial dysfunction, favoring the accumulation of ROS, thereby perpetuating inflammation. Furthermore, reduced autophagy in aging chondrocytes hinder the clearance of damaged mitochondria, exacerbating oxidative stress. Herein, we have developed a simple and environmentally friendly strategy to fabricate hydrogen-releasing nanozymes (Se-HMPB@AB@COS) that spontaneously release hydrogen gas, effectively treating osteoarthritis through antioxidant, anti-inflammatory, and mitochondrial dysfunction reversal mechanisms. During the process of hydrogen therapy, small hydrogen molecules can readily penetrate mitochondria, specifically reducing the levels of •OH thereby protecting mitochondrial function. Our research further unveils that hydrogen therapy can effectively enhance mitophagy and delay chondrocyte senescence. In vivo, Se-HMPB@AB@COS encapsulated with chondroitin sulfate significantly promotes the synthesis of collagen II, inhibits the degradation of extracellular matrix, and reduces inflammatory factors. Overall, this study innovatively synthesized a hydrogen-releasing nanozyme, demonstrating its effectiveness in inhibiting oxidative stress, inflammation, promoting mitophagy and extracellular matrix synthesis, thereby reducing cartilage and mitochondrial damage, and delaying OA progression.
Longevity Relevance Analysis
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The paper claims that a hydrogen-releasing nanoenzyme can alleviate osteoarthritis by reducing oxidative stress and reversing mitochondrial dysfunction. This research addresses the underlying mechanisms of aging-related degeneration in joint health, making it relevant to longevity and age-related disease intervention.
Dowrey, T. W., Cranston, S. F., Skvir, N. J. ...
· molecular biology
· Boston University School of Medicine, Center for Regenerative Medicine
· biorxiv
Centenarians represent a human model of resilience to age-related decline, yet resiliency mechanisms remain elusive. Here, we establish an induced pluripotent stem cell (iPSC)-based platform to interrogate resilience signatures in centenarians. IPSC-derived neurons from centenari...
Centenarians represent a human model of resilience to age-related decline, yet resiliency mechanisms remain elusive. Here, we establish an induced pluripotent stem cell (iPSC)-based platform to interrogate resilience signatures in centenarians. IPSC-derived neurons from centenarians exhibit transcriptional programs promoting synaptic integrity, calcium homeostasis, and cholesterol biosynthesis, while suppressing proteostatic stress pathways. Functionally, these neurons maintain stable calcium dynamics, reduced baseline mitochondrial activity, and energy-efficient homeostasis. Upon challenge, centenarian-derived neurons mount a robust stress response, in contrast to attenuated responses in non-centenarian controls. This resilience signature parallels adaptations in long-lived mammals and aligns with healthy brain aging, while showing erosion in Alzheimers disease and cancer. Our platform provides a scalable human model for dissecting resilience biology offering a framework to extend healthspan and mitigate age-related decline.
Longevity Relevance Analysis
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The paper claims that iPSC-derived neurons from centenarians exhibit unique resilience signatures that promote healthy aging and stress responses. This research is relevant as it explores the underlying mechanisms of resilience in centenarians, potentially addressing root causes of aging and contributing to the understanding of longevity.
Jingjing Wen, Jingjing Liu, Yumei Nie ...
· Polysaccharides
· National Key Laboratory for Development and Utilization of Forest Food Resources, Zhejiang A&F University, Hangzhou 311300, China.
· pubmed
The activity of procyanidin C1 (PCC1) is limited by poor intestinal targeting, while traditional delivery systems typically neglect the adjuvant activity of the wall material. This study aimed to explore the potential of Polygonatum polysaccharides (PSP) as wall materials for del...
The activity of procyanidin C1 (PCC1) is limited by poor intestinal targeting, while traditional delivery systems typically neglect the adjuvant activity of the wall material. This study aimed to explore the potential of Polygonatum polysaccharides (PSP) as wall materials for delivery systems with synergistic effects. A novel PCC1 yolk-shell nanoparticles delivery system (PCC1-P/L NPs) were fabricated using lysine as a cross-linking agent, achieving a drug loading efficiency of 93.57 %. Molecular docking analysis revealed that PSP interacted with PCC1 and lysine through hydrogen bonds and hydrophobic interactions. We further evaluated the targeted delivery efficiency and synergistic effect of PCC1-P/L NPs. It significantly increased the PCC1 concentrations in the intestine by twofold. Furthermore, PCC1-P/L NPs exerted a synergistic anti-aging effect, extending the maximum lifespan of Drosophila by 30.8 %, which significantly exceeded the effect of PCC1 or PSP alone. Moreover, the delivery system potently suppressed the accumulation of pH 3+ and esg + cells and preserved gut integrity. This study highlights PSP as a multifunctional wall material and offers a new strategy for anti-aging.
Longevity Relevance Analysis
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The study claims that a novel yolk-shell nanoparticles delivery system significantly enhances the anti-aging effects of procyanidin C1, extending lifespan in Drosophila by 30.8%. This research is relevant as it explores a potential method for enhancing lifespan and addresses mechanisms related to aging rather than merely treating age-related diseases.
Erin Baker, Encarnacion Montecino-Rodriguez, Shili Xu ...
· Aging cell
· Departments of Pathology and Laboratory Medicine, UCLA School of Dentistry, Los Angeles, California, USA.
· pubmed
B cell development declines with age, but how structural changes in the marrow environment contribute to that process is incompletely understood. Multiplexed volumetric imaging revealed that B lineage cells were enriched near bone, and trabecular bone in particular, in young mice...
B cell development declines with age, but how structural changes in the marrow environment contribute to that process is incompletely understood. Multiplexed volumetric imaging revealed that B lineage cells were enriched near bone, and trabecular bone in particular, in young mice. However, B cell progenitors were depleted from these regions in strains of old mice that exhibited senile osteoporosis. In striking contrast, the age-related decline of B lymphopoiesis was attenuated in mice in which bone mass was maintained over the lifespan and could be completely abrogated by concomitantly blocking TLR4 signaling. In addition to demonstrating that developing B lineage cells are not randomly distributed in the marrow, these results indicate that the age-related decline in B lymphopoiesis is influenced by the loss of salutary and not just an increase in inhibitory signals.
Longevity Relevance Analysis
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The paper claims that the age-related decline in B lymphopoiesis is influenced by the loss of supportive signals from the bone microenvironment and can be mitigated by blocking TLR4 signaling. This research is relevant as it explores mechanisms underlying aging processes and potential interventions that could enhance immune function in the elderly, addressing root causes of age-related decline rather than merely treating symptoms.
Matthias Brosz, Johanna Buck, Fabian Grünewald ...
· Biophysical journal
· Heidelberg Institute for Theoretical Studies. Am Schloss-Wolfsbrunnenweg 35, 69117 Heidelberg, Germany; Institute for Scientific Computing, Heidelberg University, Im Neuenheimer Feld 205, 69120 Heidelberg, Germany.
· pubmed
Collagen is a prevalent protein in the animalia kingdom, especially in mammals. It is abundant in all connective tissue such as bone or ligaments and thus it is subjected to substantial mechanical forces. Crosslinks play an essential role for the structural and mechanical integri...
Collagen is a prevalent protein in the animalia kingdom, especially in mammals. It is abundant in all connective tissue such as bone or ligaments and thus it is subjected to substantial mechanical forces. Crosslinks play an essential role for the structural and mechanical integrity of collagen, determining its stiffness and rigidity. Until now, studies on collagen including crosslinks have either been confined to fully atomistic simulations, which are computationally intensive and restrict the accessible time and length scales, or to coarse-grained descriptions that do not resolve the force response on a residue-level and therefore do not consider the triple helical structure and the connectivity of crosslinks. To bridge this gap, we report the development and validation of a computational model based on the Martini 3 coarse-grained force field, in which we parametrized the fibrillar collagen structure including crosslinks. We validated the model, through extensive equilibrium and non-equilibrium molecular dynamics simulations, against experimental properties and all-atom simulations. Because the type and distribution of crosslinks vary with aging, we expect that this collagen model can be employed to provide insights into age-related changes in tissue mechanics and guide the development of biomimetic materials.
Longevity Relevance Analysis
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The paper presents a novel coarse-grained model for collagen fibrils that incorporates crosslinks, which can provide insights into age-related changes in tissue mechanics. This research is relevant as it addresses the structural changes in collagen associated with aging, potentially informing strategies for biomimetic materials that could mitigate age-related tissue degeneration.
Lingyan Yang, Shixiang Wang, Zhiping Qiao ...
· Exosomes
· Guangzhou National Laboratory, No.9 Xing Dao Huan Bei Road, Guangzhou International Bio Island, Guangzhou, Guangdong Province, China.
· pubmed
WNT signaling is an essential pathway regulating tissue morphogenesis and regeneration. However, harnessing the pathway for regenerative medicine has been challenging due to the lack of approaches to identify and deliver specific WNT ligands to the target tissue. Herein, we repor...
WNT signaling is an essential pathway regulating tissue morphogenesis and regeneration. However, harnessing the pathway for regenerative medicine has been challenging due to the lack of approaches to identify and deliver specific WNT ligands to the target tissue. Herein, we reported that WNT and R-spondin (RSPO) proteins could be transported on engineered exosomes and activate the pathway synergistically. We showed that WNT3A and RSPO1 co-treatment could effectively regulate hepatic cell fate and uncovered functional crosstalk with the PPARα signaling pathway. Moreover, dual-ligand-carrying exosome (exoWNT3A/RSPO1) hyperactivated the WNT signaling and promoted efficient hepatic organoid growth compared to the small molecule inhibitor CHIR99021. Importantly, the exosome can be efficiently delivered for robust WNT signaling activation in the liver. Remarkably, exoWNT3A/RSPO1 could accelerate liver repair and regeneration under various conditions, including acute and chronic injuries and aging-associated phenotypes. Collectively, our work revealed the broad therapeutic effects of WNT signaling activation in the liver through the dual-ligand-carrying exosomes.
Longevity Relevance Analysis
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The paper claims that dual-ligand engineered exosomes can synergistically activate WNT signaling to promote liver repair and regeneration. This research is relevant as it explores mechanisms that could potentially address liver aging and regeneration, which are critical aspects of longevity and age-related decline in organ function.
Liu, X., Liu, X., Luo, L. ...
· neuroscience
· Penn State University
· biorxiv
Menopause affects the aging process in women through significant ovarian hormone production decline in midlife. Women who experience early menopause face an accelerated physiological aging rate, along with impaired memory and increased risks of neurodegenerative diseases. However...
Menopause affects the aging process in women through significant ovarian hormone production decline in midlife. Women who experience early menopause face an accelerated physiological aging rate, along with impaired memory and increased risks of neurodegenerative diseases. However, it remains elusive how the timing of menopause affects brain activity, which could be crucial for understanding menopause-related acceleration of aging and increased risk of dementia. Recent studies have revealed a highly structured infra-slow (< 0.1 Hz) global brain activity across species and linked it to arousal and memory functions, as well as waste clearance in Alzheimer\'s diseases (AD). In this study, we examined how this global brain activity relates to age of menopause using resting-state fMRI data from the Human Connectome Project-Aging dataset. We found that women who experienced earlier menopause (mean menopausal age 45{+/-}3.5 yr) exhibited weaker global brain activity (p = 5.0x10-4) with reduced coupling to cerebrospinal fluid (CSF) flow (p = 0.017) compared to age-matched later-menopausal women (mean menopausal age 54{+/-}1.2 yr). Differences appeared mainly in higher-order brain regions, where activation levels correlated with memory performance in earlier but not in intermediate or later menopausal women. These findings highlight brain activity changes linked to early menopause, suggesting a potential mechanism underlying memory decline and the increased risk of AD and dementias in early-onset menopausal women.
Longevity Relevance Analysis
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Early menopause is associated with reduced global brain activity, which may contribute to memory decline and increased risk of neurodegenerative diseases. The study addresses how early menopause affects brain activity, linking it to aging processes and potential mechanisms underlying age-related cognitive decline.
Qiao Wu, Eric T Klopack, Jung Ki Kim ...
· Aging
· Max Planck Institute for Human Development, Max Planck Research Group Biosocial-Biology, Social Disparities, and Development, Berlin, Germany. wu@mpib-berlin.mpg.de.
· pubmed
Cellular senescence, a hallmark of aging, can be quantified by the gene expression composite scores for the canonical senescence pathway (CSP), senescence initiating pathway (SIP), senescence response pathway (SRP), a summary of the three, and the SenMayo gene list; however, thes...
Cellular senescence, a hallmark of aging, can be quantified by the gene expression composite scores for the canonical senescence pathway (CSP), senescence initiating pathway (SIP), senescence response pathway (SRP), a summary of the three, and the SenMayo gene list; however, these have not been probed in representative populations. Using RNA sequencing data from the U.S. representative Health and Retirement Study (HRS) sample (N = 3580), we examine how these composite scores relate to sociobehavioral factors and aging-related outcomes. Senescence scores generally increase with age except for CSP. Higher scores are observed in women and individuals with class II obesity. All scores, except for CSP, are associated with accelerated epigenetic aging, physiological dysregulation, multimorbidity, cognitive decline, and 6-year mortality (all p < 0.05). These associations largely persist after adjustment for DunedinPACE. Our findings suggest that cellular senescence gene expression composite scores capture meaningful variation in aging-related health and complement existing epigenetic aging biomarkers.
Longevity Relevance Analysis
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The paper claims that gene expression composite scores of cellular senescence are associated with various aging-related health outcomes. This research is relevant as it explores cellular senescence, a fundamental aspect of aging, and its relationship with health outcomes, potentially contributing to our understanding of aging mechanisms.
Hongying Wang, Chia-Shan Wu, Danilo Landrock ...
· GeroScience
· Department of Nutrition, Texas A&M University, College Station, TX, 77843, USA.
· pubmed
Aging is accompanied by progressive declines in metabolic and cognitive functions. Growth hormone secretagogue receptor (GHSR), a receptor for the gut hormone ghrelin, is highly expressed in neurons and plays a crucial role in metabolic regulation. We previously reported that age...
Aging is accompanied by progressive declines in metabolic and cognitive functions. Growth hormone secretagogue receptor (GHSR), a receptor for the gut hormone ghrelin, is highly expressed in neurons and plays a crucial role in metabolic regulation. We previously reported that aged global GHSR-ablated mice are lean and insulin-sensitive, and that neuronal GHSR-deleted mice (Syn1-cre;Ghsr
Longevity Relevance Analysis
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The paper claims that suppression of GHSR in neurons can protect against aging-associated metabolic and cognitive impairments. This research addresses mechanisms related to metabolic regulation and cognitive decline in aging, which are central to understanding and potentially mitigating the effects of aging.
Enaam Alghamdi, Keiko Kono
· Cancer science
· Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan.
· pubmed
Cellular senescence is a state of stable cell cycle arrest accompanied by heightened immune activity, contributing to aging and age-related diseases. Although once regarded as a terminal and static condition, cellular senescence is now recognized as a dynamic and highly regulated...
Cellular senescence is a state of stable cell cycle arrest accompanied by heightened immune activity, contributing to aging and age-related diseases. Although once regarded as a terminal and static condition, cellular senescence is now recognized as a dynamic and highly regulated process controlled by complex molecular networks. In vitro, it can be triggered by a variety of stimuli, including telomere attrition, DNA damage, oncogene activation, mitochondrial dysfunction, and others. However, the precise in vivo triggers of cellular senescence remain unclear. Recent findings from our group demonstrate that plasma membrane damage can induce cellular senescence in cultured normal human fibroblasts. Notably, the gene expression profile of these cells shares key characteristics with the cells localized near fibrotic cutaneous wounds in humans. In this review, we highlight recent advances in understanding the diverse subtypes of cellular senescence and their underlying regulatory networks, their context-dependent roles in tumorigenesis, and the therapeutic potential and challenges associated with targeting senescent cells. Unraveling the heterogeneity of cellular senescence holds promise for harnessing the beneficial roles of cellular senescence while mitigating its pro-tumorigenic and pro-aging effects.
Longevity Relevance Analysis
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Plasma membrane damage can induce cellular senescence in normal human fibroblasts. The paper addresses the mechanisms of cellular senescence, which is a key process in aging and age-related diseases, and explores potential therapeutic strategies to mitigate its negative effects.
Mitali P Lavhale, Satish K Mandlik, Vaibhav M Shinde ...
· Inflammopharmacology
· Bharati Vidyapeeth (Deemed to Be University), Poona College of Pharmacy, Erandwane, Pune, Maharashtra, 411038, India.
· pubmed
Osteoporosis (OP) is a progressive skeletal disorder characterized by reduced bone mass, structural deterioration, and increased fracture risk, particularly in postmenopausal women and the elderly. Oxidative stress and inflammation are key contributors to the disruption of bone r...
Osteoporosis (OP) is a progressive skeletal disorder characterized by reduced bone mass, structural deterioration, and increased fracture risk, particularly in postmenopausal women and the elderly. Oxidative stress and inflammation are key contributors to the disruption of bone remodeling in OP. Nuclear factor erythroid 2-related factor 2 (Nrf2), a master regulator of cellular redox homeostasis, has gained attention for its role in bone metabolism. This review explores Nrf2's regulatory influence on osteoblast (OB) and osteoclast (OC) activity. In OBs, moderate Nrf2 activation protects against reactive oxygen species (ROS)-induced apoptosis, enhances differentiation, and supports bone formation. In contrast, both insufficient and excessive Nrf2 expression may impair OB function. In OCs, Nrf2 suppresses ROS-mediated pathways such as MAPK and NF-κB, thereby inhibiting differentiation and resorptive activity. Nrf2 also attenuates inflammation by downregulating pro-inflammatory mediators and inhibiting NF-κB nuclear translocation. Nrf2 knockout animal models exhibit age-related bone loss, reduced bone mineral density, impaired trabecular structure, and delayed fracture healing. These effects are exacerbated by increased oxidative stress and inflammation. Notably, sex-specific differences have been observed, with female mice showing greater susceptibility to Nrf2 deficiency, potentially due to interactions with estrogen signaling. Nrf2 also regulates osteocyte-specific gene expression, further reinforcing its role in bone maintenance and mechanotransduction. Therapeutic activation of Nrf2 using agents such as bardoxolone methyl, sulforaphane, quercetin, and curcumin shows promise in mitigating bone loss. However, precise modulation is crucial to avoid potential adverse effects. Overall, Nrf2 represents a promising target for the prevention and treatment of OP and related musculoskeletal disorders.
Longevity Relevance Analysis
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Nrf2 signaling plays a crucial role in bone health and osteoporosis management by regulating oxidative stress and inflammation. The paper is relevant as it addresses the underlying mechanisms of bone health, which are critical in the context of aging and age-related diseases.
Roshani Jha, Jian Shi, Maggie J Sedgwick ...
· Aging cell
· Pulmonary, Allergy, Critical Care and Sleep Medicine, Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
· pubmed
Aging generates a variety of phenotypes in the lungs with increased alveolar airspaces or emphysema, decreased surface area, and increased disease susceptibility. Senescence, oxidative stress, and mitochondrial dysfunction are known contributory factors. However, the underlying m...
Aging generates a variety of phenotypes in the lungs with increased alveolar airspaces or emphysema, decreased surface area, and increased disease susceptibility. Senescence, oxidative stress, and mitochondrial dysfunction are known contributory factors. However, the underlying mechanisms promoting unhealthy aging remain unclear. Adenine nucleotide Translocase 1 (ANT1), a mitochondrial ADP/ATP transporter, is important for mitochondrial metabolism. Loss of ANT1 has been implicated in the development of pulmonary fibrosis, a disease characterized by accelerated lung aging, through mitochondrial dysfunction and senescence. To determine the role of ANT1 in normal lung aging, we analyzed aged human lung data from the Human Lung Cell Atlas and evaluated the ANT1-related mechanism in an aged genetic mouse and in vitro models. Analysis of SLC25A4 (ANT1) gene expression in the Human Lung Cell Atlas data from healthy adults (ages 20-80) revealed an age-associated reduction in SLC25A4 in alveolar type 2 pneumocytes (AT2), and airway ciliated and basal cells. Using an Ant1-deficient mouse model, aged Ant1-null mice developed increased airway thickening and airway resistance on lung function testing compared to aged wildtype mice. In human airway epithelial cells, ANT1 knockdown resulted in upregulation of senescence and tissue remodeling genes, including COL8A1. Aged Ant1-null mice and aged human airways similarly had increased p21 expression in AT2 and airway club cells, increased SASP markers, and increased COL8A1 expression in the airways. We demonstrate for the first time that ANT1, an important multifunctional mitochondrial protein, plays a significant role in the pathogenesis of lung aging by regulating senescence and airway matrix remodeling.
Longevity Relevance Analysis
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The paper claims that reduced ANT1 plays a significant role in the pathogenesis of lung aging by regulating senescence and airway matrix remodeling. This research addresses a potential root cause of aging-related lung dysfunction, contributing to the understanding of mechanisms underlying unhealthy aging.
Jian Zhang, Yang Li, Rui Ding ...
· Intervertebral Disc Degeneration
· Department of Orthopedics, The Second Affiliated Hospital, Jiangxi Medical College, Nanchang University, Nanchang, 330006, Jiangxi, China.
· pubmed
Intervertebral disc degeneration (IDD) is a chronic degenerative disorder marked by nucleus pulposus cells (NPCs) senescence and extracellular matrix (ECM) degradation, which is a key pathological factor leading to low back pain. Current clinical treatments are mainly limited to ...
Intervertebral disc degeneration (IDD) is a chronic degenerative disorder marked by nucleus pulposus cells (NPCs) senescence and extracellular matrix (ECM) degradation, which is a key pathological factor leading to low back pain. Current clinical treatments are mainly limited to symptomatic relief without effectively reversing the degenerative process.
Longevity Relevance Analysis
(4)
The paper claims that a ROS-degradable hydrogel delivering LOXL2-LNPs can rescue disc degeneration by suppressing cellular senescence and oxidative damage. This research addresses the underlying mechanisms of intervertebral disc degeneration, which is related to aging processes and cellular senescence, thus contributing to the understanding of age-related degeneration.
Muhammad Afzal, M M Rekha, Samir Sahoo ...
· Inflammopharmacology
· Department of Pharmaceutical Sciences, Pharmacy Program, Batterjee Medical College, 21442, Jeddah, Saudi Arabia.
· pubmed
Osteoarthritis (OA) is a common joint condition correlated with aging, characterized by the gradual degradation of cartilage, alterations in the subchondral bone, and ongoing low-level inflammation. There is growing evidence that the senescence-associated secretory phenotype (SAS...
Osteoarthritis (OA) is a common joint condition correlated with aging, characterized by the gradual degradation of cartilage, alterations in the subchondral bone, and ongoing low-level inflammation. There is growing evidence that the senescence-associated secretory phenotype (SASP) of chondrocytes, which includes the continuous release of IL1β, IL6, TNFα, MMP3, and MMP13, offers a crucial function in driving the pathology of OA. In this review, we consolidate the existing knowledge on the molecular processes that lead to chondrocyte aging, such as NFκB/MAPK signaling, oxidative stress, mitochondrial dysfunction, and epigenetic changes. We also critically assess senotherapeutic strategies, including senolytics (dasatinib + quercetin, ABT263), senomorphics (rapamycin, metformin, pterostilbene), anti-oxidant nanomaterials, and therapies based on extracellular vesicles that specifically reduce SASP while maintaining cartilage health. This study looks at SASP biomarkers in different joint tissues. It also examines how nanotechnology and EV strategies can help renew aging chondrocytes. This review examines the impact of cartilage changes on the aging process. It offers guidance on delaying osteoarthritis, identifies early indicators, and proposes innovative treatments to maintain joint health as grow older.
Longevity Relevance Analysis
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Targeting the senescence-associated secretory phenotype (SASP) can modify osteoarthritis and improve joint health in aging individuals. This paper is relevant as it addresses the underlying mechanisms of aging-related joint degeneration and proposes strategies to mitigate these effects, aligning with the goals of longevity research.
Ashley Johnson, Troy Rought, Jacob Aronov ...
· Immunity & ageing : I & A
· Department of Pharmaceutical Sciences, Binghamton University School of Pharmacy and Pharmaceutical Sciences, PO Box 6000, Binghamton, NY, 13902-6000, USA.
· pubmed
Cellular senescence is a fundamental biological process characterized by stable cell cycle arrest, genomic instability, and the acquisition of a proinflammatory secretory phenotype. While senescence is traditionally associated with aging, growing evidence reveals that chronic inf...
Cellular senescence is a fundamental biological process characterized by stable cell cycle arrest, genomic instability, and the acquisition of a proinflammatory secretory phenotype. While senescence is traditionally associated with aging, growing evidence reveals that chronic infections such as viral, bacterial, and protozoan parasites can serve as powerful inducers of senescence, contributing to premature aging and long-term tissue damage. This review explores the diverse mechanisms by which persistent pathogens trigger or sustain senescence in host cells. We highlight how these chronic infections manipulate host DNA repair, mitochondrial dynamics, telomere maintenance, oxidative stress, and immune function to promote senescence and immunosenescence. Emerging findings also reveal how pathogens hijack the host cellular machinery to induce senescence across various tissue types. In many cases, senescence not only enables pathogen persistence but also drives pathological outcomes such as fibrosis, neurodegeneration, cardiomyopathy, and immune exhaustion. Collectively, this emerging evidence highlights a unifying strategy among diverse pathogens: the exploitation of cellular senescence to support chronic infection and promote disease. Understanding how infectious agents drive senescence offers new insights into age-related pathologies and highlights potential therapeutic targets, such as senolytic and senomorphic agents, to mitigate the long-term impacts of chronic infections.
Longevity Relevance Analysis
(4)
Chronic infections can induce cellular senescence, contributing to age-related pathologies. The paper is relevant as it explores mechanisms linking chronic infections to cellular senescence, which is a key process in aging and age-related diseases.
Josh Bartz, Xiao Ma, Lei Zhang ...
· Transcriptome
· Masonic Institute on the Biology of Aging and Metabolism, University of Minnesota, Minneapolis, MN, USA.
· pubmed
Biological aging is associated with progressively more severe genetic and epigenetic alterations. While these changes are expected to affect the transcriptional profile of cells, the magnitude of that effect is unknown as the aging transcriptome is still poorly understood. Unders...
Biological aging is associated with progressively more severe genetic and epigenetic alterations. While these changes are expected to affect the transcriptional profile of cells, the magnitude of that effect is unknown as the aging transcriptome is still poorly understood. Understanding the aging transcriptional landscape will give us greater insight into how cells are affected by and/or respond to the aging process. To facilitate the large-scale exploration of the aging transcriptome, we report the development of the Human Cell Aging Transcriptome Atlas (HCATA). HCATA, contains single-cell RNA-sequencing datasets from 76 publications totaling 92 million cells and 3,475 tissue-level samples across more than 50 tissue types with ages ranging from 0 to 103 years. HCATA includes a genome browser that allows users to interactively explore age-related differential expression, as well as functions to explore related pathways at the tissue and cell-type level. HCATA is publicly accessible at http://hcata-xiaodonglab.org:3304 .
Longevity Relevance Analysis
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The paper presents the Human Cell Aging Transcriptome Atlas (HCATA), which provides a comprehensive resource for understanding age-associated transcriptomic alterations across human tissues. This research is relevant as it aims to elucidate the transcriptional changes associated with aging, potentially leading to insights into the biological mechanisms of aging and informing strategies for lifespan extension.
Farhan Khodaee, Rohola Zandie, Louis-Alexandre Leger ...
· npj aging
· Institute for Medical Engineering and Science, Massachusetts Institute of Technology, Cambridge, MA, USA. farhank@mit.edu.
· pubmed
We propose a new theory for aging based on dynamical systems and provide a data-driven computational method to quantify the changes at the cellular level. We use ergodic theory to decompose the dynamics of changes during aging and show that aging is fundamentally a dissipative pr...
We propose a new theory for aging based on dynamical systems and provide a data-driven computational method to quantify the changes at the cellular level. We use ergodic theory to decompose the dynamics of changes during aging and show that aging is fundamentally a dissipative process within biological systems, akin to dynamical systems where dissipation occurs due to non-conservative forces. To quantify the dissipation dynamics, we employ a transformer-based machine learning algorithm to analyze gene expression data, incorporating age as a token to assess how age-related dissipation is reflected in the embedding space. By evaluating the dynamics of gene and age embeddings, we provide a cellular aging map (CAM) and identify patterns indicative of divergence in gene embedding space, nonlinear transitions, and entropy variations during aging for various tissues and cell types. Our results provide a novel perspective on aging as a dissipative process and introduce a computational framework that enables measuring age-related changes with molecular resolution.
Longevity Relevance Analysis
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The paper claims that aging can be quantitatively analyzed as a dissipative process using a cellular aging map derived from gene expression data. This research is relevant as it addresses the fundamental mechanisms of aging, proposing a new theoretical framework that could lead to insights into lifespan extension and age-related biological processes.
Alexander Yu Pulver, Roman E Tokmachev, Natalie A Pulver ...
· Extracellular Vesicles
· Laboratory of Postgenomic Research of the Research, Institute of Experimental Biology and Medicine, N. N. Burdenko Voronezh State Medical University, 10, Studentskaya Str., 394036, Voronezh, Russian Federation. pulver.ibs@gmail.com.
· pubmed
Extracellular vesicles present a promising alternative to stem cells in regenerative medicine and gerontology. They offer significant advantages over cell transplantation, demonstrating potential for slowing aging and treating age-related diseases. Extracellular vesicles secreted...
Extracellular vesicles present a promising alternative to stem cells in regenerative medicine and gerontology. They offer significant advantages over cell transplantation, demonstrating potential for slowing aging and treating age-related diseases. Extracellular vesicles secreted by diverse cell types modulate inflammation, stimulate tissue regeneration, and exhibit anti-inflammatory and immunomodulatory properties. This work explores the therapeutic potential of extracellular vesicles as alternatives to cell therapy, examining their key advantages and current limitations. It specifically focuses on their roles within established aging mechanisms and their dual utility as biomarkers and therapeutic agents. Critical aspects of extracellular vesicle translation are addressed, including standardized methods for production, storage stability optimization, and engineering strategies for cargo loading and targeting. Extracellular vesicles possess unique biological properties-inherent biocompatibility, low immunogenicity, ability to cross biological barriers, and high biological activity at low doses. Preclinical studies across various age-related pathologies (neurodegeneration, cardiovascular disease, sarcopenia) consistently report efficacy in reducing inflammation, promoting tissue repair, and improving functional outcomes. These findings strongly support the capacity of extracellular vesicles to mimic many therapeutic effects of parental cells while mitigating risks like tumorigenicity or immunorejection associated with whole-cell therapies. Overcoming challenges in scalable manufacturing, quality control, regulatory standardization, and targeted delivery is essential for the clinical translation of extracellular vesicles. Despite these hurdles, their compelling preclinical evidence and inherent advantages position them as a major future direction. They are expected to play a key role in combating age-related decline and advancing regenerative medicine, becoming a cornerstone of next-generation biomedical interventions over the next decade.
Longevity Relevance Analysis
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Extracellular vesicles have the potential to slow aging and treat age-related diseases by modulating inflammation and promoting tissue regeneration. The paper is relevant as it addresses therapeutic strategies that target underlying mechanisms of aging rather than merely treating symptoms of age-related diseases.
Yuki Nakao, Makiko Mori, Yuta Sekiguchi ...
· Advanced healthcare materials
· Department of Nephrology, Graduate School of Medical and Dental Sciences, Institute of Science Tokyo, Tokyo, 113-8510, Japan.
· pubmed
In advancing pathophysiological models to assess renal drug responses, kidney organoids derived from human pluripotent stem cells mark notable progress. However, replicating aging- and senescence-related pathologies remains a challenge. In this study, an alternative model is intr...
In advancing pathophysiological models to assess renal drug responses, kidney organoids derived from human pluripotent stem cells mark notable progress. However, replicating aging- and senescence-related pathologies remains a challenge. In this study, an alternative model is introduced using "tubuloids"-epithelial-like structures generated from primary human renal proximal tubular epithelial cells (hRPTECs) isolated from resected human kidneys. Bulk RNA-seq deconvolution confirmed that tubuloids are highly differentiated and predominantly composed of proximal tubule-like cells. Exposure to cisplatin increased γH2AX, Kidney Injury Molecule-1, and Cleaved Caspase-3, markers for DNA damage response, epithelial damage, and apoptosis, respectively. Repeated cisplatin administration resulted in the upregulation of senescence markers and secretion of inflammatory cytokines, consistent with a senescence-associated secretory phenotype (SASP). Supernatants from cisplatin-treated tubuloids triggered myofibroblast activation, suggesting early fibrotic changes. A hRPTEC-derived tubuloid model of cisplatin-induced kidney injury is successfully developed that mimics senescence, SASP, and fibrosis-hallmarks of chronic kidney disease. This model offers a promising human-relevant platform for studying renal epithelial responses and drug screening.
Longevity Relevance Analysis
(4)
The study presents a human kidney tubuloid model that mimics cellular senescence and fibrosis, which are key features of aging-related kidney disease. This research is relevant as it addresses mechanisms of cellular senescence and fibrosis, which are important aspects of aging and age-related diseases.
Jhommara Bautista, Sofía Ojeda-Mosquera, Adriana Altamirano-Colina ...
· Gastrointestinal Microbiome
· Cancer Research Group (CRG), Faculty of Medicine, Universidad de Las Américas, Quito, Ecuador.
· pubmed
Circadian rhythms are endogenous, near-24-h cycles that synchronize physiological and behavioral functions with environmental cues such as light/dark cycles and food intake. While the central pacemaker in the suprachiasmatic nucleus orchestrates these rhythms, peripheral clocks d...
Circadian rhythms are endogenous, near-24-h cycles that synchronize physiological and behavioral functions with environmental cues such as light/dark cycles and food intake. While the central pacemaker in the suprachiasmatic nucleus orchestrates these rhythms, peripheral clocks distributed across organs, including the gastrointestinal tract, exhibit autonomous oscillations that are crucial for local homeostasis. Concurrently, the gut microbiota undergoes diurnal fluctuations in composition and metabolic activity that are tightly coupled to host circadian mechanisms. Recent discoveries reveal a bidirectional relationship: host clocks influence microbial dynamics through feeding behavior, immune signaling, and epithelial renewal, whereas microbial metabolites such as short-chain fatty acids (SCFAs) and bile acids modulate circadian gene expression in peripheral tissues. Disruptions in circadian alignment, whether due to genetic mutations, lifestyle factors like shift work and irregular eating, or environmental perturbations, lead to microbial dysbiosis, metabolic dysfunction, inflammation, and heightened disease susceptibility. Conversely, altered microbiota rhythms can feed back into host systems, impairing metabolic control, immune responses, and neuroendocrine signaling. This reciprocal regulation extends to disease contexts, where circadian-microbiota misalignment contributes to obesity, type 2 diabetes, inflammatory bowel disease, and even neuropsychiatric disorders. This review synthesizes current insights into the molecular and physiological cross-talk between host circadian clocks and the gut microbiota. We discuss how temporal dynamics at the cellular, systemic, and microbial levels are integrated and how their disruption underlies pathogenesis. We further explore the potential of chronobiotics and chrononutrition, including time-restricted feeding (TRF) and bioactive dietary compounds, as emerging strategies to restore circadian-microbial synchrony and improve metabolic health. Understanding this intricate dialogue between host and microbiome may pave the way for personalized, time-based interventions to enhance healthspan and prevent disease occurrence or progression. KEY POINTS: • Circadian rhythms and microbiota form a bidirectional regulatory feedback loop. • Disruption of circadian-microbial synchrony drives metabolic and inflammatory disease. • Chrononutrition offers novel strategies to restore health via circadian-microbiota alignment.
Longevity Relevance Analysis
(4)
The paper claims that the bidirectional interactions between circadian rhythms and the gut microbiome can influence metabolic health and disease susceptibility. This research is relevant as it explores the underlying mechanisms of circadian-microbiota interactions that may contribute to aging and age-related diseases, suggesting potential interventions to enhance healthspan.
Nadia Akhiyat, Elias Hellou, Ilke Ozcan ...
· European journal of preventive cardiology
· Department of Cardiovascular Medicine, Mayo Clinic, 200 First St SW, Rochester, MN 55905, USA.
· pubmed
Endothelial dysfunction can be regarded as the earliest feature of vascular aging and may occur in individuals without traditional risk factors for cardiovascular disease. Once present, endothelial dysfunction is known to increase the risk for atherosclerosis, cardiovascular dise...
Endothelial dysfunction can be regarded as the earliest feature of vascular aging and may occur in individuals without traditional risk factors for cardiovascular disease. Once present, endothelial dysfunction is known to increase the risk for atherosclerosis, cardiovascular diseases and complications such as stroke or death. Identification of individuals with early features of vascular aging remains challenging and has fuelled investigative efforts to associated biologic, imaging, and digital markers with endothelial dysfunction. This review highlights emerging and traditional methods to identify patients with early endothelial dysfunction and summarizes available and experimental therapies aimed at mitigating the vascular aging process.
Longevity Relevance Analysis
(4)
Endothelial dysfunction is identified as an early feature of vascular aging that can lead to serious cardiovascular complications. The paper is relevant as it addresses a fundamental aspect of vascular aging, which is a key contributor to overall aging processes and longevity.
Maïly Kervella, Fabrice Bertile, Alexandra Granger-Farbos ...
· Molecular ecology
· CNRS UMR 7178, Institut Pluridisciplinaire Hubert Curien, Strasbourg, France.
· pubmed
Within the same species of eusocial insects, individuals of different castes typically display widely different life-history traits: sterile workers live for a few months, while queens can live for decades. Ageing theories emphasise the importance of metabolism and oxidative stre...
Within the same species of eusocial insects, individuals of different castes typically display widely different life-history traits: sterile workers live for a few months, while queens can live for decades. Ageing theories emphasise the importance of metabolism and oxidative stress in explaining longevity, with mitochondrial bioenergetics standing at the crossroads of energy and reactive oxygen species production. The study of mitochondrial functioning is therefore of great relevance in determining the nature of the mechanisms that explain the contrasting longevities between insect social castes. We addressed this question in the eusocial black garden ant Lasius niger. Our findings reveal that caste differences in mitochondrial bioenergetics and the oxidative balance only partially align with oxidative stress theory predictions. Long-lived queens display lower metabolic rates and mitochondrial density, yet maintain higher cellular energy availability, as reflected by a high adenylate energy charge (AEC). This may result from enhanced mitochondrial maintenance processes and potentially a specific recourse to the purine salvage pathway, promoting ATP availability while limiting oxidative cost. Our study highlights so far unrevealed bioenergetic adaptations that might contribute to the queens' remarkable lifespan.
Longevity Relevance Analysis
(4)
Long-lived ant queens exhibit unique mitochondrial bioenergetic adaptations that contribute to their extended lifespan. The study addresses the mechanisms underlying longevity, focusing on metabolic processes and oxidative stress, which are central to understanding aging.
Andrew Jones, De'anne Donnell, Elizabeth G King ...
· Fertility
· Division of Biological Sciences, University of Missouri-Columbia, Missouri, United States of America.
· pubmed
Developmental conditions, including temperature, diet, and parasite exposure, can shape adult fitness phenotypes across species. While studies often examine the independent effects of early-life and adult conditions on life history traits, fewer have focused on their interactive ...
Developmental conditions, including temperature, diet, and parasite exposure, can shape adult fitness phenotypes across species. While studies often examine the independent effects of early-life and adult conditions on life history traits, fewer have focused on their interactive effects, particularly in genetically diverse populations. Here, we investigate how larval and adult diet interact to influence lifespan and fecundity in a genetically diverse population of Drosophila melanogaster. We manipulated protein availability across larval and adult stages and found significant larval-adult diet interactions affecting both traits, though in different ways. Several key patterns emerged, including age- and sex-specific effects, survival differences in the post-median life phase, shifts in the timing of peak fecundity, and sustained egg production in older stages. Protein reduction increased male maximum lifespan and female lifetime fecundity, while lower adult protein intake delayed egg-laying by approximately two weeks, particularly in flies that also experienced low developmental protein. These findings underscore the importance of assessing life history traits dynamically over time, as interactions between developmental and adult environments may drive complex, non-additive effects that are not apparent in cross-sectional measurements. Considering both additive and interactive effects in diverse genetic backgrounds will be critical for understanding the evolutionary and ecological consequences of nutritional variation.
Longevity Relevance Analysis
(4)
The paper claims that larval and adult diet interact to influence lifespan and fecundity in Drosophila melanogaster. This research is relevant as it explores the interactive effects of nutrition across developmental stages on lifespan, contributing to the understanding of factors that may influence aging and longevity.
Jianfei Mu, Qinlu Lin, Shuang Wang ...
· Gastrointestinal Microbiome
· Molecular Nutrition Branch, National Engineering Research Center of Rice and By-product Deep Processing, College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, Hunan, P.R. China.
· pubmed
Aging-related neuroinflammation drives cognitive decline; however, the mechanisms by which gut microbiota-modulating bioactive compounds, such as rice bran peptide KF-8, mitigate this process remain unclear. Here, KF-8 was shown to ameliorate age-related traits in aged mice by re...
Aging-related neuroinflammation drives cognitive decline; however, the mechanisms by which gut microbiota-modulating bioactive compounds, such as rice bran peptide KF-8, mitigate this process remain unclear. Here, KF-8 was shown to ameliorate age-related traits in aged mice by reshaping gut microbiota, notably by stabilizing Akkermansia muciniphila (AKK), to suppress systemic inflammation and cognitive deficits. Specifically, antibiotic-treated mice receiving KF-8 exhibited neuroinflammation and declined cognition. KF-8 and AKK synergistically attenuated pro-inflammatory pathways, particularly TNF-α, in the blood and in the hippocampus. While TNF-α antibodies mirrored KF-8's benefits, TNF-α recombinant protein negated KF-8's protective effects. Combined KF-8 and AKK interventions aligned with TNF-α antibody outcomes, underscoring TNF-α's pivotal role. Our findings reveal that KF-8 enhances healthy aging by modulating gut microbiota, sustaining AKK, and suppressing TNF-α-driven neuroinflammation, thereby rescuing cognitive function in aged mice.
Longevity Relevance Analysis
(4)
Rice bran peptide KF-8 modulates gut microbiota to suppress TNF-α-driven neuroinflammation and cognitive decline in aged mice. The study addresses mechanisms that may contribute to healthy aging by targeting inflammation and gut microbiota stability, which are critical factors in the aging process.
Yufan Liu, Chenglong Li
· npj aging
· Capital Medical University, Beijing, China.
· pubmed
The biological aging acceleration predicts both morbidity and mortality, while few investigations have examined its utility in evaluating transitions, e.g. development patterns, of atrial fibrillation (AF) and dementia. We aimed to investigate the utility of biological aging acce...
The biological aging acceleration predicts both morbidity and mortality, while few investigations have examined its utility in evaluating transitions, e.g. development patterns, of atrial fibrillation (AF) and dementia. We aimed to investigate the utility of biological aging acceleration in predicting transitions of AF and dementia. A total of 402,955 participants (mean [SD] age: 56.5 [8.1] years; men: 45.9%) in the UK Biobank were included. Biological age was calculated using the phenotypic age, based on the chronological age and 9 biomarkers. A multi-state survival analysis was conducted to examine transition patterns between AF and dementia. The increased biological aging acceleration was consistently associated with all transition patterns between AF and dementia, including transitions from incident AF or dementia to the comorbidity. Strong linear associations were observed. Our findings highlight the overlooked utility of biological aging acceleration in evaluating the transitions of AF and dementia in the general population.
Longevity Relevance Analysis
(4)
The paper claims that biological aging acceleration can predict transitions between atrial fibrillation and dementia. This research is relevant as it explores biological aging as a potential underlying factor in age-related diseases, rather than merely addressing symptoms.
Yu Chen, Zhixi Chen, Hao Wang ...
· Nucleotidyltransferases
· Shanghai Key Laboratory of Maternal Fetal Medicine, Clinical and Translational Research Center of Shanghai First Maternity and Infant Hospital, Frontier Science Center for Stem Cell Research, School of Life Sciences and Technology, Tongji University, Shanghai, China.
· pubmed
Efficient DNA repair might make possible the longevity of naked mole-rats. However, whether they have distinctive mechanisms to optimize functions of DNA repair suppressors is unclear. We find that naked mole-rat cyclic guanosine monophosphate-adenosine monophosphate synthase (cG...
Efficient DNA repair might make possible the longevity of naked mole-rats. However, whether they have distinctive mechanisms to optimize functions of DNA repair suppressors is unclear. We find that naked mole-rat cyclic guanosine monophosphate-adenosine monophosphate synthase (cGAS) lacks the suppressive function of human or mouse homologs in homologous recombination repair through the alteration of four amino acids during evolution. The changes enable cGAS to retain chromatin longer upon DNA damage by weakening TRIM41-mediated ubiquitination and interaction with the segregase P97. Prolonged chromatin binding of cGAS enhanced the interaction between repair factors FANCI and RAD50 to facilitate RAD50 recruitment to damage sites, thereby potentiating homologous recombination repair. Moreover, the four amino acids mediate the function of cGAS in antagonizing cellular and tissue aging and extending life span. Manipulating cGAS might therefore constitute a mechanism for life-span extension.
Longevity Relevance Analysis
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The paper claims that alterations in the cGAS protein in naked mole-rats enhance DNA repair mechanisms, potentially extending lifespan. This research is relevant as it investigates a specific mechanism that may contribute to longevity and aging, focusing on the biological processes that could mitigate age-related decline.
Tingting Li, Peilin Zhu, Joseph Adams ...
· Aging cell
· Department of Biomedical Sciences, Quillen College of Medicine, East Tennessee State University, Johnson City, Tennessee, USA.
· pubmed
Cardiovascular diseases remain the leading cause of mortality worldwide, with aging as a major risk factor. Endothelial cell (EC) dysfunction, driven by cellular senescence, is central to age-related cardiomyopathy. Despite its clinical significance, the molecular mechanisms unde...
Cardiovascular diseases remain the leading cause of mortality worldwide, with aging as a major risk factor. Endothelial cell (EC) dysfunction, driven by cellular senescence, is central to age-related cardiomyopathy. Despite its clinical significance, the molecular mechanisms underlying endothelial senescence remain incompletely defined. In this study, we observed that the expression of the endothelial-specific gene heat shock protein family A member 12B (HSPA12B) declines significantly with age. HSPA12B deficiency in mice accelerates age-related EC senescence and cardiac dysfunction, whereas HSPA12B overexpression mitigates EC senescence, highlighting its protective role against vascular aging. Mechanistically, HSPA12B deficiency impairs X-box binding protein 1 (XBP1) transcriptional activity and consequently reduces the expression of its downstream target genes suppressor/enhancer of lin-12-like (SEL1L) and HMG-CoA reductase degradation protein-1 (HRD1). This disruption compromises endoplasmic reticulum-associated degradation (ERAD) of Stimulator of interferon genes (STING), resulting in persistent activation of the cyclic GMP-AMP synthase (cGAS)-STING pathway, a critical driver of EC senescence. In contrast, increased HSPA12B expression enhances XBP1 nuclear translocation and upregulates SEL1L and HRD1, thereby attenuating age-related STING activation. Importantly, pharmacological inhibition of STING reversed the senescent phenotype caused by HSPA12B deficiency. Similarly, enhancing XBP1 activity restored SEL1L and HRD1 expression, reduced STING activation, and alleviated EC senescence. Conversely, SEL1L deficiency or HRD1 inhibition exacerbated STING activation and abolished the protective effects of HSPA12B. Collectively, these findings reveal a previously unrecognized role for HSPA12B in preserving endothelial homeostasis during aging by regulating XBP1-mediated ER-associated degradation of STING and highlight HSPA12B as a potential therapeutic target for age-related cardiovascular dysfunction.
Longevity Relevance Analysis
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HSPA12B protects against age-related endothelial cell senescence by regulating STING degradation. The study addresses a molecular mechanism underlying endothelial dysfunction in aging, which is a critical aspect of age-related cardiovascular diseases, thus contributing to the understanding of aging processes.
Leah Cha, Gabrielle R Rinne, Judith E Carroll ...
· Aging
· Department of Psychology, University of California, Los Angeles, USA.
· pubmed
Adverse experiences over the lifespan can increase risk for poor health outcomes, likely operating in part through accelerated biological aging. From a life course perspective, the extent to which adverse experiences in adulthood predict biological aging will vary as a function o...
Adverse experiences over the lifespan can increase risk for poor health outcomes, likely operating in part through accelerated biological aging. From a life course perspective, the extent to which adverse experiences in adulthood predict biological aging will vary as a function of early life adversity, yet few studies have tested this. In this cross-sectional, pre-registered study, we examined associations of early life adversity and past-year potentially traumatic events and their interaction with telomere length in a sample of racially and ethnically diverse and predominantly low-income women (n = 127). We also tested hair cortisol as a potential pathway linking early life adversity and potentially traumatic events with telomere length. Women reported on experiences of early life adversity and the number and negative impact of past-year potentially traumatic events during interviews. Buccal cells and hair samples were collected to assess telomere length and cortisol, respectively. More negative impact of past-year potentially traumatic events was associated with shorter telomere length. However, the strength of this association was conditional on early life adversity and strongest at lower levels of early life adversity. Both greater early life adversity and more negative impact of potentially traumatic events were associated with higher hair cortisol, but hair cortisol was not associated with telomere length. Results suggest that early life adversity modifies the association between subsequent trauma and telomere length and advances understanding of how lifespan adversity shapes biological aging. These findings may inform future research to examine dynamic biological processes linking lifespan adverse experiences to health using longitudinal designs.
Longevity Relevance Analysis
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The paper claims that early life adversity modifies the association between subsequent trauma and telomere length. This research is relevant as it explores the relationship between adverse experiences across the lifespan and biological aging, contributing to the understanding of how these factors may influence health outcomes related to aging.
R P H De Maeyer, J Sikora, O V Bracken ...
· Aging cell
· The Nuffield Department of Orthopaedics, Rheumatology and Musculoskeletal Science, University of Oxford, Oxford, UK.
· pubmed
Biological sex is a crucial, but poorly understood variable in age-related susceptibility to infection. Monocytes are important immune cells responsible for initiating and resolving inflammatory responses to infection. While changes in monocyte populations result in increased sus...
Biological sex is a crucial, but poorly understood variable in age-related susceptibility to infection. Monocytes are important immune cells responsible for initiating and resolving inflammatory responses to infection. While changes in monocyte populations result in increased susceptibility to infection, there is limited research on the impact of age and sex on human monocyte phenotype and function. The aim of this work was to dissect the impact of increasing age and biological sex on human monocyte phenotype and function. Here, we show that older females have increased inflammatory intermediate and non-classical monocytes compared to young. These monocyte subsets were the most inflammatory ex vivo, and their frequency correlated with markers of inflammageing. Proteomic analysis of sorted monocyte populations demonstrated that the three human monocyte subsets have largely distinct phenotypes. Key age-associated protein pathways were identified, including complement cascade and phagocytosis. We confirmed the proteomics findings, showing that circulating C3 concentrations were reduced with age in females but not males. This decrease in complement in older females resulted in reduced monocyte phagocytosis. Crucially, we demonstrate that in peri/menopausal females, hormone replacement therapy (HRT) reversed this expansion in intermediate monocytes and decreased circulating CRP as compared to age-matched controls. Importantly, peri/menopausal females on HRT had increased C3 serum concentrations and significant improvement in monocyte phagocytosis. The data presented here indicate the importance of menopause in aging monocyte phenotype and function. These data highlight the potential use of HRT in restoring monocyte function in females during aging and potentially improving anti-pathogen immunity.
Longevity Relevance Analysis
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The paper claims that hormone replacement therapy can reverse age-associated inflammatory changes in monocytes in menopausal females. This research is relevant as it explores the biological mechanisms of aging and suggests a potential intervention that could improve immune function in aging populations.
Bogaards, F., Gehrmann, T., Beekmam, M. ...
· epidemiology
· Leiden University Medical Center. Center for Molecular Medicine Cologne, University Hospital Cologne. Cologne Excellence Cluster on Cellular Stress Responses in
· medrxiv
The effects of lifestyle interventions on the blood metabolome and transcriptome are well studied, but the interplay between tissues is not well understood. In a multi-omics multi-tissue design we study how the serum proteome reflects health improvements in age-related deficits s...
The effects of lifestyle interventions on the blood metabolome and transcriptome are well studied, but the interplay between tissues is not well understood. In a multi-omics multi-tissue design we study how the serum proteome reflects health improvements in age-related deficits such as body composition, fat and glucose metabolism and low-grade inflammation in older adults undergoing a 13-week lifestyle intervention (GOTO trial). Significant intervention effects on the fasting blood proteome were observed in both sexes, with downregulated immune-related pathways, including the complement system, inflammation, cholesterol transport and coagulation. These findings associated with improved body composition and immune-metabolic health markers. In addition, we found that the intervention-induced changes in the transcriptome of muscle and subcutaneous adipose tissue (SAT) biopsies were correlated with changes of the corresponding circulating proteins. The most notable correlations were observed for proteins involved in inflammatory processes and corresponding gene expression in the SAT. Our findings emphasize the broad beneficial effects of moderate lifestyle interventions in older adults and how circulating proteins such as FN1, LGALS3BP and PRG4 reflect the immune-metabolic health benefits.
Longevity Relevance Analysis
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The paper claims that a 13-week lifestyle intervention leads to significant changes in the blood proteome associated with improved immune-metabolic health in older adults. This research is relevant as it explores the effects of lifestyle changes on biological markers that may influence aging processes and age-related health outcomes.
Eliza A Gaylord, Mariko H Foecke, Ryan M Samuel ...
· Science (New York, N.Y.)
· Eli and Edythe Broad Center for Regeneration Medicine and Stem Cell Research, University of California, San Francisco, San Francisco, CA, USA.
· pubmed
The mouse is a tractable model for human ovarian biology, however its utility is limited by incomplete understanding of how transcription and signaling differ interspecifically and with age. We compared ovaries between species using three-dimensional imaging, single-cell transcri...
The mouse is a tractable model for human ovarian biology, however its utility is limited by incomplete understanding of how transcription and signaling differ interspecifically and with age. We compared ovaries between species using three-dimensional imaging, single-cell transcriptomics, and functional studies. In mice, we mapped declining follicle numbers and oocyte competence during aging; in human ovaries, we identified cortical follicle pockets and decreases in density. Oocytes had species-specific gene expression patterns during growth that converged toward maturity. Age-related transcriptional changes were greater in oocytes than granulosa cells across species, although mature oocytes change more in humans. We identified ovarian sympathetic nerves and glia; axon density increased in aged ovaries and, when ablated in mice, perturbed folliculogenesis. This comparative atlas defines shared and species-specific hallmarks of ovarian biology.
Longevity Relevance Analysis
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The paper claims to identify shared and species-specific hallmarks of ovarian biology across age. This research is relevant as it explores the biological mechanisms of aging in ovarian function, which could contribute to understanding age-related fertility decline and potential interventions.
Espinoza, K., Schaler, A. W., Gray, D. T. ...
· neuroscience
· Department of Physiology, David Geffen School of Medicine, University of California, Los Angeles
· biorxiv
Microglial capacity to adapt to tissue needs is a hallmark feature of these cells. New studies show that mitochondria critically regulate the phenotypic adaptability of macrophages. To determine whether these organelles play similar roles in shaping microglial phenotype, we gener...
Microglial capacity to adapt to tissue needs is a hallmark feature of these cells. New studies show that mitochondria critically regulate the phenotypic adaptability of macrophages. To determine whether these organelles play similar roles in shaping microglial phenotype, we generated transgenic crosses to accurately visualize and manipulate microglial mitochondria. We find that brain-region differences in microglial attributes and responses to aging are accompanied by regional differences in mitochondrial mass and aging-associated mitochondrial remodeling. Microglial mitochondria are also altered within hours of LPS injections and microglial expression of inflammation-, trophic-, and phagocytosis-relevant genes is strongly correlated with expression levels of mitochondria-relevant genes. Finally, direct genetic manipulation of microglial mitochondria alters microglial morphology and leads to brain-region specific effects on microglial gene expression. Overall, this study advances our understanding of microglial mitochondria and supports the idea that mitochondria influence basal microglia phenotype and phenotypic remodeling that takes place over hours to months.
Longevity Relevance Analysis
(4)
Mitochondria play a critical role in shaping microglial phenotype and their adaptability to aging and inflammation. The study explores mechanisms that could influence aging processes through mitochondrial function in microglia, which is relevant to understanding the root causes of aging and potential interventions.
Yu, D., Germann, J., Murtaza, G. ...
· neuroscience
· The Buck Institute for Research on Aging
· biorxiv
Alterations in metabolism, stress response, sleep, circadian rhythms, and neuroendocrine processes are key features of aging and neurodegeneration. These fundamental processes are regulated by the hypothalamus, yet how its functionally distinct subregions and cell types change du...
Alterations in metabolism, stress response, sleep, circadian rhythms, and neuroendocrine processes are key features of aging and neurodegeneration. These fundamental processes are regulated by the hypothalamus, yet how its functionally distinct subregions and cell types change during human aging and Alzheimer\'s Disease (AD) remains largely unexplored. Here, we present HypoAD, a comprehensive atlas of the human hypothalamus in aging and AD, integrating high-resolution MRI from 202 individuals with single-nucleus RNA-seq (snRNA-seq) of 614,403 nuclei from young, AD, and age-matched non-dementia controls. Our analysis reveals that hypothalamic subregions governing metabolism, stress, and circadian rhythms are particularly vulnerable, exhibiting significant changes in both volumes and gene expression during aging and AD. At the molecular level, machine learning models identified the inflammatory response and regulators of circadian rhythms as key cellular predictors of AD. These signatures were reflected in specific cell types: microglia transitioned to a pro-inflammatory state, while inhibitory neurons within sleep- and circadian-regulating hypothalamic subregions showed the most profound transcriptional alterations, including disruptions in ligand-receptor interactions and G-protein-coupled receptor signaling. Together, HypoAD provides a high-resolution volumetric map and a comprehensive transcriptomic atlas of the human hypothalamus in aging and AD, linking lifestyle and behavioral changes to their underlying volumetric and molecular pathways. Additionally, HypoAD provides a framework to investigate hypothalamic dysfunction and establishes a roadmap for targeted interventions aimed at mitigating physiological disruptions to potentially slow disease progression.
Longevity Relevance Analysis
(4)
The paper claims that specific hypothalamic subregions and cell types undergo significant volumetric and transcriptional changes during aging and Alzheimer's Disease, which may link lifestyle and behavioral changes to underlying molecular pathways. This research is relevant as it explores the functional changes in the hypothalamus that could contribute to aging and neurodegeneration, potentially informing interventions aimed at mitigating age-related physiological disruptions.
John C Martinez, Andrei Seluanov, Vera Gorbunova
· Longevity
· Department of Biology, University of Rochester, Rochester, NY, USA.
· pubmed
A DNA repair function in a cytosolic sensor demonstrates a potential role in naked mole-rat longevity.
A DNA repair function in a cytosolic sensor demonstrates a potential role in naked mole-rat longevity.
Longevity Relevance Analysis
(4)
The paper suggests that a DNA repair function in a cytosolic sensor may contribute to the longevity of naked mole-rats. This research is relevant as it explores potential mechanisms underlying longevity, which could inform strategies for addressing the root causes of aging.
Wenjiao Xu, Jiaqi Bo, Liyan Jia ...
· Melatonin
· Department of Gastroenterology, Beijing Hospital, National Center of Gerontology, Institute of Geriatric Medicine, Chinese Academy of Medical Science, Beijing, China.
· pubmed
Aging is associated with increased susceptibility to bacterial infections, particularly multidrug-resistant (MDR) strains, which often result in antibiotic treatment failure and high mortality rates in the elderly. However, effective preventive and therapeutic strategies remain l...
Aging is associated with increased susceptibility to bacterial infections, particularly multidrug-resistant (MDR) strains, which often result in antibiotic treatment failure and high mortality rates in the elderly. However, effective preventive and therapeutic strategies remain limited. Herein, we showed that aged mice exhibited higher susceptibility to colistin-resistant Salmonella enterica serotype Typhimurium and methicillin-resistant Staphylococcus aureus compared to young mice. Notably, pre-supplementation with melatonin, a hormone markedly reduced in the aging gut, effectively restricted MDR bacterial infections in aged mice by enhancing microbial colonization resistance. Mechanistically, melatonin-induced alterations in the gut microbiota, particularly the enrichment of butyrate-producing bacteria including Faecalibaculum, Muribaculaceae, and Ruminococcus, played a pivotal role in enhancing resistance to pathogenic bacteria. Elevated gut butyrate levels following melatonin pre-supplementation not only preserved intestinal barrier integrity and mitigated inflammaging, but also directly inhibited pathogenic bacterial growth by disrupting intracellular pH homeostasis, leading to proton motive force dissipation and metabolic disturbances. These findings underscore melatonin and its metabolite, butyrate, as promising candidates for the prevention of MDR bacterial infections in the aging population.
Longevity Relevance Analysis
(4)
Melatonin supplementation enhances resistance to multidrug-resistant bacterial infections in aged mice by promoting butyrate-producing gut microbiota. This study addresses a significant issue in aging related to increased susceptibility to infections, suggesting a potential intervention that targets underlying mechanisms of aging rather than merely treating symptoms.
Pallab Bhattacharya, Shailendra Saraf, Anirban Barik ...
· Cardiolipins
· Department of Pharmacology and Toxicology, National Institute of Pharmaceutical Education and Research (NIPER), Ahmedabad, Gandhinagar 382355 Gujarat, India. Electronic address: pallab.bhattacharya@niperahm.res.in.
· pubmed
The crucial influence of mitochondria in ischemic stroke pathophysiology presents many unexplored yet promising avenues for therapeutic strategies and clinical outcomes. Post-stroke mitochondrial dysfunction contributes to aggravated levels of calcium overload and apoptosis. This...
The crucial influence of mitochondria in ischemic stroke pathophysiology presents many unexplored yet promising avenues for therapeutic strategies and clinical outcomes. Post-stroke mitochondrial dysfunction contributes to aggravated levels of calcium overload and apoptosis. This dysfunction is signified by disruption of the mitochondrial lipids such as cardiolipin, along with mitochondrial DNA mutation, leading to an imbalance in mitophagy. Calcium overload-mediated calcineurin overexpression has been reported to exacerbate mitochondrial damage and further contribute to neuronal apoptosis. In our study, we explored the alterations in the mitochondrial function following inhibition of the calcium-mediated calcineurin levels in post-stroke condition. In a rodent model of middle cerebral artery occlusion (MCAo), we observed that the inhibition of the calcium channels in post-stroke condition led to restored neuronal histology and viability following upregulation of the antioxidant levels. At the mitochondrial level, calcium channel inhibition downregulated calcineurin activation and normalized cardiolipin concentration, mitochondrial membrane potential, and respiratory control ratio in post-stroke condition. This inhibition also balanced the mitochondrial dynamics proteins and mitophagy towards neuronal recovery following ischemic stress. Moreover, it also normalized the expression of TERT, a key marker of mitochondrial health and aging. These findings highlight the role of calcium-mediated calcineurin in influencing mitochondrial dysfunction and aging in ischemic stroke. Thus, calcium channel inhibition offers a promising therapeutic strategy by preserving mitochondrial integrity and promoting neuroprotection following stroke.
Longevity Relevance Analysis
(4)
Inhibition of calcium channels following stroke restores mitochondrial function and promotes neuronal recovery. The paper addresses mitochondrial dysfunction, a key factor in aging, and explores a potential therapeutic strategy that could mitigate age-related decline in neuronal health.
Majlish, A. N. K., Bourgeois, S., Lye, S. H. ...
· neuroscience
· University of Alabama
· biorxiv
Calcium (Ca2+) homeostasis is fundamental to neuronal physiology, including in the regulation of membrane excitability and synaptic transmission. Disruptions in the ion transporters regulating Ca2+ influx and efflux are clearly linked to seizure disorders and age-related neurodeg...
Calcium (Ca2+) homeostasis is fundamental to neuronal physiology, including in the regulation of membrane excitability and synaptic transmission. Disruptions in the ion transporters regulating Ca2+ influx and efflux are clearly linked to seizure disorders and age-related neurodegenerative disease. Yet, the specific contributions of variants in genes encoding these transporters to neurological disease remain to be fully understood. Drosophila melanogaster has proven to be a powerful genetic model for uncovering such mechanisms, particularly through studies of mutants that display temperature-sensitive (TS) behavioral phenotypes. In a forward genetic screen, we identified a mutant line that exhibited TS convulsions along with progressive, age-dependent neurodegeneration. We mapped the mutation to Nckx30c, specifically within the transmembrane ion-binding region of this K+-dependent Na+/Ca2+ exchanger. Characterization of this mutant, together with a second Nckx30c allele, revealed TS convulsions, impaired locomotion, a markedly shortened lifespan, neurodegeneration with age, along with structural defects at larval and adult neuromuscular junctions (NMJs). Gene expression analysis confirmed that Nckx30c levels were reduced in heads of Nckx30c loss-of-function mutants. Tissue-specific manipulation revealed that knockdown of Nckx30c in neurons recapitulated the TS convulsions, locomotor defects, and shortened lifespan phenotypes. Drosophila Nckx30c is highly conserved and shares homology with mammalian SLC24A2, a solute carrier family 24 member whose neurological role is not yet fully elucidated. Our work establishes Nckx30c as an essential regulator of neuronal health and provides an in vivo framework for investigating the contribution of SLC24A2 to neuronal Ca2+ homeostasis, seizures and age-related neurodegeneration.
Longevity Relevance Analysis
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Nckx30c is identified as a crucial regulator of neuronal health, influencing temperature-sensitive convulsions and age-related neurodegeneration. The study explores the genetic basis of neurodegeneration and its connection to aging, addressing mechanisms that could underlie age-related diseases.
Qi Wang, Jingting Huang, Qida He ...
· Aging cell
· Department of Data Science, College of Computing, City University of Hong Kong, Hong Kong, Hong Kong SAR, China.
· pubmed
Aging occurs in a heterogeneous manner across different organs, leading to varying risks of chronic diseases and mortality. Biological age offers a more comprehensive reflection of the aging process and is a stronger predictor of disease risk and lifespan. Recent advances in plas...
Aging occurs in a heterogeneous manner across different organs, leading to varying risks of chronic diseases and mortality. Biological age offers a more comprehensive reflection of the aging process and is a stronger predictor of disease risk and lifespan. Recent advances in plasma proteomics have enabled the development of organ-specific aging clocks, revealing the distinct aging trajectories and their clinical implications. We used protein-based aging estimators for 11 organs, applying them to plasma data using elastic net regularization. A comprehensive analysis of associations was conducted with 86 lifestyle and environmental factors, 657 diseases through phenome-wide association studies (PheWAS), and all-cause mortality. Our findings revealed that organ aging is influenced by lifestyle factors and baseline health conditions, highlighting its dynamic and modifiable nature. Additionally, accelerated organ aging is associated with a higher incidence of disease and an increased risk of all-cause mortality, particularly when it occurs earlier in life. Our large-scale lifestyle atlas and PheWAS offer actionable insights into the modifiable drivers of organ aging, advancing strategies for disease prevention and longevity.
Longevity Relevance Analysis
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Organ aging is influenced by lifestyle factors and baseline health conditions, which can be modifiable to improve health outcomes. The paper is relevant as it explores the biological mechanisms of aging and identifies modifiable factors that could potentially address the root causes of aging and improve longevity.
Huiyi Wang, Jozsef Kovecses, Guillaume Durandau
· IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society
· Not available
· pubmed
Falls are one of the leading causes of non-disease death and injury in the elderly, partly due to the loss of muscle mass in a musculoskeletal disorder named sarcopenia. Studying the impact of this muscle weakness on standing balance through direct human experimentation poses eth...
Falls are one of the leading causes of non-disease death and injury in the elderly, partly due to the loss of muscle mass in a musculoskeletal disorder named sarcopenia. Studying the impact of this muscle weakness on standing balance through direct human experimentation poses ethical dilemmas, involves high costs, and fails to fully capture the internal dynamics of the muscle. To address these limitations, we employ neuromusculoskeletal modeling to explore the impact of sarcopenia on balance. In this study, we introduce a novel full-body MSK model comprising both the torso and lower limbs, with 290 muscle actuators controlling 23 degrees of freedom and supporting varying levels of sarcopenia. Using reinforcement learning coupled with curriculum learning and muscle synergy representations, we trained an agent to perform standing balance on a backward-sliding plate and compared its behavior to human experiments. Our results demonstrate that, without pre-recorded experimental data, both healthy and sarcopenic agents can reproduce ankle and hip balancing strategies consistent with experimental findings. Furthermore, we show that as the degree of sarcopenia increases, the agent adapts its balancing strategy based on the platform's acceleration. The full code is open-sourced and can be found in this repository: https://github.com/cherylwang20/StandingBalance.
Longevity Relevance Analysis
(4)
The study demonstrates that a reinforcement learning agent can adapt its balance strategies in response to varying levels of sarcopenia. This paper is relevant as it addresses the impact of sarcopenia, a condition associated with aging, on balance, which is crucial for preventing falls and improving longevity in the elderly.
Ghazizadeh, S., Cherif, H., Mannarino, M. ...
· cell biology
· McGill University
· biorxiv
Cell senescence drives inflammation and tissue breakdown and is a key hallmark of aging. Low back pain is strongly linked to age-related degeneration of spine tissues, and with an accumulation of senescent. Here we show that preventive administration of the senolytic agents o-van...
Cell senescence drives inflammation and tissue breakdown and is a key hallmark of aging. Low back pain is strongly linked to age-related degeneration of spine tissues, and with an accumulation of senescent. Here we show that preventive administration of the senolytic agents o-vanillin and RG-7112 prevent the development of pain-related behaviour in young sparc-/- mice. Treated mice exhibit a reduction of senescence markers in the intervertebral discs, vertebral endplates, vertebral bone, and spinal cord, alongside a dampening of pro-inflammatory senescence-associated secretory factors in these tissues. This early senolytic intervention also preserves intervertebral disc volume and vertebral bone microarchitecture, indicating protection against structural degeneration of the spine. These findings demonstrate that targeting cellular senescence at an early stage can mitigate degenerative changes and pain, supporting senolytic therapy as a promising preventive strategy for musculoskeletal decline.
Longevity Relevance Analysis
(4)
Preventive administration of senolytic agents can mitigate degenerative changes and pain in low back pain models. The paper addresses the root cause of aging by targeting cellular senescence, which is a key factor in age-related degeneration and inflammation.
Dong-Gi Mun, Ganesh P Pujari, Gunveen Sachdeva ...
· Clinical proteomics
· Department of Laboratory Medicine and Pathology, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA.
· pubmed
The preservation of tissue architecture and morphology in formalin-fixed paraffin-embedded (FFPE) tissues enables spatial resolution at the cellular and sub-cellular levels. Laser capture microdissection (LCM) combined with liquid chromatography tandem mass spectrometry analysis ...
The preservation of tissue architecture and morphology in formalin-fixed paraffin-embedded (FFPE) tissues enables spatial resolution at the cellular and sub-cellular levels. Laser capture microdissection (LCM) combined with liquid chromatography tandem mass spectrometry analysis permits collection of tissue areas with spatial context for proteome profiling from FFPE slides. In this study, we performed proteome profiling of non-diseased renal tubulointerstitial tissue in a cohort of young (< 40 years) and old (> 70 years) individuals with the goal of spatially correlating the histomorphology to the proteomic profile. To perform in-depth characterization of renal tubulointerstitium and to identify renal aging-associated proteins, a multiplexing strategy using tandem mass tags (TMT) was employed, resulting in the quantitation of 7,355 proteins. Our approach allowed for identification of proteins with low abundance such as fibrocystin and ninein-like protein. Notably, 162 solute carrier proteins from 47 solute carrier families were identified, which were enriched in proximal and distal tubule cells. Finally, we discovered a proteomic signature associated with renal aging, which includes metalloproteinase inhibitor 3, nicotinamide N-methyltransferase, matrix metallopeptidase 7, phenazine biosynthesis-like domain-containing protein and solute carrier family 23 member 1. Overall, our study demonstrates the power of LCM combined with proteomics to leverage archived FFPE tissue samples for investigating proteomic alterations in the renal tubulointerstitium with age at a high depth of proteome coverage.
Longevity Relevance Analysis
(4)
The study identifies a proteomic signature associated with renal aging in non-diseased tissue. This research is relevant as it explores the biological alterations associated with aging, potentially contributing to our understanding of the mechanisms underlying age-related changes in renal function.
Qingwen Wang, Zhixiao Xu, Xinwen Ding ...
· Genome medicine
· Department of Anesthesiology and Surgical Intensive Care Unit, School of Medicine and School of Biomedical Engineering, Xinhua Hospital, Shanghai Jiao Tong University, Shanghai, China.
· pubmed
Aging is a complex biological process characterized by progressive molecular alterations across multiple organ systems, significantly influencing disease susceptibility and mortality. Unraveling molecular interactions driving aging is crucial for interventions promoting healthy a...
Aging is a complex biological process characterized by progressive molecular alterations across multiple organ systems, significantly influencing disease susceptibility and mortality. Unraveling molecular interactions driving aging is crucial for interventions promoting healthy aging and mitigating senescence. However, the systemic mechanisms governing both inter-organ interactions and organ-specific aging trajectories remain incompletely characterized.
Longevity Relevance Analysis
(4)
The paper presents a comprehensive atlas of proteome and metabolome changes in mouse organs from adulthood to aging. This research is relevant as it aims to elucidate the molecular interactions and systemic mechanisms that drive aging, which is essential for developing interventions to promote healthy aging and address the root causes of age-related decline.
Motohiro Sekiya, Kenta Kainoh, Wanpei Chen ...
· Nature aging
· Department of Endocrinology and Metabolism, Institute of Medicine, University of Tsukuba, Tsukuba, Japan. msekiya@md.tsukuba.ac.jp.
· pubmed
Within each cell, metabolite-sensing factors respond to coordinate metabolic homeostasis. How metabolic homeostasis is regulated intercellularly and how this may become dysregulated with age, however, remains underexplored. Here we describe a system regulated by a metabolite sens...
Within each cell, metabolite-sensing factors respond to coordinate metabolic homeostasis. How metabolic homeostasis is regulated intercellularly and how this may become dysregulated with age, however, remains underexplored. Here we describe a system regulated by a metabolite sensor, CtBP2. CtBP2 is secreted via exosomes in response to reductive metabolism, which is suppressed by oxidative stress. Exosomal CtBP2 administration extends lifespan in aged mice and improves healthspan in particular by reducing frailty. Mechanistically, we identify activation of CYB5R3 and AMPK downstream of exosomal CtBP2. Consistently, serum CtBP2 levels decrease with age and are negatively associated with cardiovascular disease incidence in humans yet are elevated in individuals from families with a history of longevity. Together our findings define a CtBP2-mediated metabolic system with potential for future clinical applications.
Longevity Relevance Analysis
(4)
The paper claims that exosomal CtBP2 administration extends lifespan in aged mice and improves healthspan by reducing frailty. This research is relevant as it explores a potential mechanism linking metabolism to lifespan extension, addressing the root causes of aging rather than merely treating age-related symptoms.
Vineall, K. G., Andrikopoulos, A., Sun, M. J. ...
· cell biology
· University of California Los Angeles
· biorxiv
Phosphatase and tensin homologue-induced kinase 1 (PINK1) is a serine/threonine kinase that plays roles in mitophagy, cell death, and regulation of cellular bioenergetics. Current approaches for studying PINK1 function depend on bulk techniques that can only provide snapshots of ...
Phosphatase and tensin homologue-induced kinase 1 (PINK1) is a serine/threonine kinase that plays roles in mitophagy, cell death, and regulation of cellular bioenergetics. Current approaches for studying PINK1 function depend on bulk techniques that can only provide snapshots of activity and could miss the dynamics and cell-to-cell heterogeneity of PINK1 activity. Therefore, we sought to develop a novel PINK1 kinase activity reporter to characterize PINK1 activity. Taking advantage of the separation of phases-based activity reporter of kinase (SPARK) design, we developed a phase separation-based PINK1 biosensor (PINK1-SPARK). With PINK1-SPARK, we observe real-time PINK1 activity in single cells treated with mitochondria depolarizing agents or pharmacological PINK1 activators. We then developed a Halo Tag-based PINK1-SPARK for multiplexed imaging of PINK1 activity with live-cell markers of mitochondrial damage. Thus, PINK1-SPARK is a new tool that enables temporal measurement of PINK1 activity in single cells, allowing for further elucidation of the role of PINK1 in mitophagy and cell function.
Longevity Relevance Analysis
(4)
The paper presents a novel biosensor to measure PINK1 activity dynamics in single cells. PINK1 is implicated in mitophagy, which is crucial for cellular health and longevity, making this research relevant to understanding mechanisms that could influence aging and age-related cellular dysfunction.
Stilz, K. A., Leonard, V. E., Rodriguez Morales, D. ...
· cell biology
· Institute of Cardiovascular Regeneration
· biorxiv
Background and aim: Aging significantly increases the risk of cardiovascular diseases, characterized by progressive cardiac dysfunction. The vascular niche is crucial for maintaining cardiac homeostasis, yet endothelial cell (EC) impairment during aging remains poorly understood....
Background and aim: Aging significantly increases the risk of cardiovascular diseases, characterized by progressive cardiac dysfunction. The vascular niche is crucial for maintaining cardiac homeostasis, yet endothelial cell (EC) impairment during aging remains poorly understood. This study investigates epigenetically regulated mechanisms mediating EC-dependent cardiac aging and identifies a critical role of Zinc finger and BTB domain-containing protein 16 (ZBTB16). Methods: Chromatin accessibility (snATAC-seq) and transcriptomic (snRNA-seq) analyses were performed on aged hearts to identify age-related regulatory changes. Functional studies using genetic models, assessed cardiac aging phenotypes. In vitro assays examined EC senescence and secretory profiles, while co-culture experiments analyzed the impact of ZBTB16-deficient EC supernatants on fibroblasts, cardiomyocytes, and neurons. Overexpression experiments in vitro and in vivo tested the potential for ZBTB16 to mitigate aging-associated dysfunction. Results: Aged hearts exhibited decreased chromatin accessibility and expression of the transcription factor ZBTB16 in both human and mice. Loss of ZBTB16 in young mice, including Zbtb16 haploinsufficient and endothelial-specific knockout mice, led to premature aging, diastolic dysfunction, and increased secretion of pro-fibrotic and inflammatory factors. Supernatants from ZBTB16-deficient ECs activated fibroblasts, induced cardiomyocyte hypertrophy, and impaired neuronal sprouting. Overexpression of ZBTB16 reversed these effects in senescent ECs and aged mice and reduced diastolic dysfunction. Mechanistic studies identified key downstream targets of ZBTB16, including nuclear receptor-interacting protein 1 (NRIP1). ZBTB16 suppressed NRIP1 expression, limiting fibroblast activation and pro-fibrotic signaling. Conclusions: ZBTB16 is a key regulator of endothelial function, maintaining vascular niche homeostasis and mitigating aging-associated cardiac dysfunction. Its loss promotes EC senescence and pro-fibrotic signaling, contributing to diastolic dysfunction. Overexpression of ZBTB16 presents a potential therapeutic strategy for preserving cardiac function during aging. These findings establish a novel role for ZBTB16 in endothelial aging and cardiovascular disease prevention.
Longevity Relevance Analysis
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ZBTB16 is a key regulator of endothelial function that mitigates aging-associated cardiac dysfunction. The study addresses the mechanisms of endothelial cell impairment during aging, which is directly related to the root causes of aging and age-related diseases, making it relevant to longevity research.
Shifeng Ling, Yixiang Zhang, Yanyang Chen ...
· Advanced materials (Deerfield Beach, Fla.)
· Department of Orthopaedics, Shanghai Key Laboratory for Prevention and Treatment of Bone and Joint Diseases, Shanghai Institute of Traumatology and Orthopaedics, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, 197 Ruijin 2nd Road, Shanghai, 200025, P. R. China.
· pubmed
Mitochondrial dysfunction-mediated ribosomal translation suppression is a hallmark of aging and a major driver of degenerative diseases, limiting mRNA therapy efficacy. Here, ionizable coenzyme Q10 (iCoQ10)-engineered lipid/fiber microplexes (iCLNP@SF) are developed that restore ...
Mitochondrial dysfunction-mediated ribosomal translation suppression is a hallmark of aging and a major driver of degenerative diseases, limiting mRNA therapy efficacy. Here, ionizable coenzyme Q10 (iCoQ10)-engineered lipid/fiber microplexes (iCLNP@SF) are developed that restore the mitochondrial-ribosomal axis to enhance mRNA translation. iCoQ10 replaces conventional ionizable lipids to form prodrugged lipid nanoparticles (iCLNP), stabilized by injectable polydopamine‑modified short fibers for in situ administration. In vitro efficacy assessments showed that iCLNP@SF synergistically enhanced mitochondrial metabolism and mRNA translation in senescent cells. Further mechanistic studies revealed that iCLNP stabilized mitochondrial membrane potential, suppressed cGAS-STING activation, and reduced eIF2α phosphorylation, thereby enhancing translation. In vivo, iCLNP@SF delivery of Gas6 mRNA increased hair follicle density by ≈50% in an androgenetic alopecia mouse model, while Runx2 mRNA delivery raised new bone formation (BV/TV) to ≈40% in defect models, both markedly outperforming conventional LNPs. Together, these findings highlight a strategy that improves mRNA therapy for degenerative diseases.
Longevity Relevance Analysis
(5)
The paper claims that ionizable coenzyme Q10-engineered lipid/fiber microplexes enhance mRNA translation by restoring mitochondrial function in senescent cells. This research addresses mitochondrial dysfunction, a key factor in aging and degenerative diseases, and proposes a novel approach to improve mRNA therapy efficacy, which is relevant to longevity research.
Na Li, Yushu Chen, Qiong Wang ...
· Stem cell research & therapy
· Department of General Medicine, The First Affiliated Hospital of Dalian Medical University, Dalian, Liaoning, 116011, China.
· pubmed
Sarcopenia, a progressive age-related decline in skeletal muscle mass and function, is closely linked to impaired regenerative capacity of satellite cells (SCs), also known as satellite cells. Age-dependent SCs dysfunction, driven by intrinsic senescence and niche dysregulation, ...
Sarcopenia, a progressive age-related decline in skeletal muscle mass and function, is closely linked to impaired regenerative capacity of satellite cells (SCs), also known as satellite cells. Age-dependent SCs dysfunction, driven by intrinsic senescence and niche dysregulation, disrupts activation, proliferation, and differentiation, thereby exacerbating regenerative deficits in sarcopenia. The SCs niche undergoes age-related remodeling, characterized by immune cell infiltration, ECM stiffening, and aberrant FAPs differentiation toward Fibro-Adipogenic lineages. Immune subsets orchestrate inflammation resolution and SCs activation during regeneration, while FAPs exhibit dual roles: transient pro-regenerative WISP1 secretion and chronic fibrotic conversion. Concurrently, vascular-neural networks sustain SCs quiescence and neuromuscular junction integrity, with age-related degradation of these systems exacerbating regenerative decline. Single-cell omics and 3D genomic studies have revealed heterotypic interactions and chromatin structural changes underlying SCs dysfunction in aging. Emerging therapeutic strategies targeting SCs rejuvenation and niche restoration-including metabolic regulation, endocrine interventions, and cell-based therapies-are complemented by advances in single-cell omics and 3D modeling technologies, which offer unprecedented opportunities to dissect niche complexity and identify novel therapeutic targets for sarcopenia. This review synthesizes recent advancements in understanding the role of SCs and their dynamic niche microenvironment in sarcopenia pathogenesis, exploring novel therapeutic strategies while underscoring the critical importance of deciphering their bidirectional interplay for developing effective interventions against age-related muscle loss.
Longevity Relevance Analysis
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The paper claims that understanding the interplay between satellite cells and their microenvironment can lead to novel therapeutic strategies for sarcopenia. This research is relevant as it addresses the mechanisms underlying age-related muscle loss, which is a significant aspect of aging and longevity.
Bingjian Wu, Ge Ge, Jiaxin Xu ...
· NF-E2-Related Factor 2
· School of Pharmacy, Changzhou University, NO. 21. Gehu Middle Road, Changzhou, 213164, Jiangsu, China.
· pubmed
Phytochemicals represent emerging anti-aging therapeutic candidates, with Marchantia polymorpha L. (liverwort) gaining significant attention due to its broad-spectrum pharmacological properties. This plant exhibits remarkable wound-healing and regenerative capabilities, making it...
Phytochemicals represent emerging anti-aging therapeutic candidates, with Marchantia polymorpha L. (liverwort) gaining significant attention due to its broad-spectrum pharmacological properties. This plant exhibits remarkable wound-healing and regenerative capabilities, making it a promising candidate for the development of modern anti-aging drugs. In the presented study, 12-ethoxy-Marchantin A (EMA), a new macrocyclic bis-bibenzyl compound, was isolated and identified from M. polymorpha. Using a Lipopolysaccharide (LPS)-induced mouse macrophage RAW264.7 macrophage model, a Caenorhabditis elegans (C. elegans) aging model, and network pharmacology analysis, we systematically investigated the pharmacological mechanisms underlying its anti-aging effects. Our results demonstrated that EMA significantly reduced inflammatory cytokines and nitric oxide (NO) in LPS-stimulated RAW264.7 cells via the nuclear factor erythroid 2-related factor 2 (Nrf2) / heme oxygenase (HO-1) pathway. Mechanistically, EMA triggered a reactive oxygen species (ROS)-mediated mitogen-activated protein kinase (MAPK)-dependent Nrf2 antioxidant signaling cascade. EMA significantly extended the lifespan and enhanced fecundity in the N2 strain of C. elegans, while reducing lipofuscin deposition and ROS levels. Additionally, EMA enhanced oxidative and heat stress resistance in the N2 strain of C. elegans. Network pharmacology revealed that its anti-aging effects may be mediated by MAPKs/Nrf2/HO-1 pathway regulation. Collectively, these findings highlight EMA as a potent anti-aging with therapeutic potential for aging-related conditions.
Longevity Relevance Analysis
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The paper claims that 12-ethoxy-Marchantin A activates the MAPK-dependent Nrf2/HO-1 signaling pathways to exert anti-aging effects. This research is relevant as it investigates a potential therapeutic compound that targets mechanisms associated with aging and lifespan extension.
Spiri, S., Sing, T. L., Phung, N. Y. ...
· molecular biology
· University of California, Berkeley
· biorxiv
During mitotic growth, Saccharomyces cerevisiae cells age by dividing asymmetrically producing young daughter cells while retaining age-associated damage in the mother cell, which will eventually become senescent. Gametogenesis naturally and completely resets this replicative lif...
During mitotic growth, Saccharomyces cerevisiae cells age by dividing asymmetrically producing young daughter cells while retaining age-associated damage in the mother cell, which will eventually become senescent. Gametogenesis naturally and completely resets this replicative lifespan, even in replicative aged cells. Methods to quantify replicative lifespan resetting have been limited to low-throughput and labor-intensive approaches based on repeated manual micromanipulation of individual cells. Here, we introduce a high-throughput microfluidic-based assay that allows systematic characterization of factors required for gametogenic rejuvenation in S. cerevisiae. A key innovation of this method involves two inert genetic modifications that enable specific enrichment of gametes. With this technique, we confirm the rejuvenation of aged precursor cells upon completion of gametogenesis and show that we can capture a wide range of gamete replicative lifespan, consistent with known longevity mutants. Excitingly, using this technique, we identify factors involved in ER-phagy as essential for full restoration of replicative lifespan in gametes. We anticipate this novel technique will enable systematic identification of genes that mediate gametogenic rejuvenation.
Longevity Relevance Analysis
(4)
The paper claims to introduce a high-throughput microfluidic-based assay that identifies factors required for gametogenic rejuvenation in Saccharomyces cerevisiae. This research is relevant as it addresses mechanisms of lifespan resetting and rejuvenation, which are central to understanding and potentially mitigating the effects of aging.
Xin-Yi Wu, Rui Wang, Qi Zhang ...
· Cell death discovery
· Department of Hepatobiliary Surgery, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, China.
· pubmed
The shortage of liver donors for liver transplantation is currently an urgent problem. Elderly donors have become an important source of donor livers, but they are more prone to ischemia reperfusion injury (IRI) in liver transplantation. Therefore, exploring the effects and mecha...
The shortage of liver donors for liver transplantation is currently an urgent problem. Elderly donors have become an important source of donor livers, but they are more prone to ischemia reperfusion injury (IRI) in liver transplantation. Therefore, exploring the effects and mechanisms of aging on liver IRI will provide a new theoretical basis for improving the survival rate of liver transplant patients. We constructed a mouse model of liver ischemia for 90 min and reperfusion for 6 or 24 h, and found that compared with young liver, the recovery of liver function in aged liver after IRI was slower. Detection of macrophage pyroptosis revealed that it was an important factor for aging deferring liver function restoration. Mechanistically, we demonstrated that aging triggered mitochondrial permeability transition pore (mPTP) channel opening to promote the release of Oxidized mtDNA (Ox-mtDNA), thereby inducing macrophage pyroptosis. Moreover, the activity of mPTP channel was mainly dependent on calcium uptake by acetylated mitochondrial calcium uniporter (MCU). These results illustrated that cytoplasmic Ox-mtDNA-induced macrophage pyroptosis was a key factor for aging exacerbating liver IRI. Calcium uptake via acetylated MCU triggered mPTP channel opening, which is an important mechanism for Ox-mtDNA release from mitochondria into the cytoplasm.
Longevity Relevance Analysis
(4)
Aging exacerbates liver ischemia and reperfusion injury through oxidized mtDNA-mediated macrophage pyroptosis. This paper addresses mechanisms related to aging that contribute to organ dysfunction, which is crucial for understanding and potentially mitigating age-related decline in organ function.
Yehezqel Elyahu, Ilana Feygin, Ekaterina Eremenko ...
· Nature aging
· The Shraga Segal Department of Microbiology, Immunology and Genetics, Faculty of Health Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
· pubmed
Aging is characterized by the progressive deterioration of tissue structure and function, leading to increased vulnerability to diseases. Senescent cells (SCs) accumulate with age, but how the immune system regulates their burden is unclear. Here we show that CD4 T cells differen...
Aging is characterized by the progressive deterioration of tissue structure and function, leading to increased vulnerability to diseases. Senescent cells (SCs) accumulate with age, but how the immune system regulates their burden is unclear. Here we show that CD4 T cells differentiate into Eomesodermin (Eomes)
Longevity Relevance Analysis
(4)
CD4 T cells differentiate into Eomesodermin to modulate cellular senescence and aging. This research addresses the immune system's role in regulating senescent cell accumulation, which is a key aspect of the aging process and its associated diseases.
Akanksha Singh, Sakshi Jaiswal, Raushan Kumar ...
· Biogerontology
· Department of Biochemistry, Faculty of Science, University of Allahabad, Allahabad, 211002, India.
· pubmed
Chrysin (5,7-dihydroxyflavone), a natural flavonoid present in honey, propolis, and various medicinal plants, has shown promise as a calorie restriction mimetic (CRM) through its glycolysis-inhibiting action. This inhibition promotes a metabolic shift toward oxidative phosphoryla...
Chrysin (5,7-dihydroxyflavone), a natural flavonoid present in honey, propolis, and various medicinal plants, has shown promise as a calorie restriction mimetic (CRM) through its glycolysis-inhibiting action. This inhibition promotes a metabolic shift toward oxidative phosphorylation and fatty acid oxidation, potentially activating beneficial pathways like AMPK and SIRT1. The mechanism likely involves the downregulation of Hexokinase-2, leading to suppressed glycolysis and promotion of apoptosis. In this study, we assessed aging biomarkers in erythrocytes, plasma, and serum after administering chrysin (100 mg/kg, orally) and D-galactose (300 mg/kg, subcutaneously) for four weeks to Wistar rats. In the D-galactose-induced aging rat model, the markers of oxidative damage, such as protein carbonyls, malondialdehyde, and advanced oxidation protein products, were found to be elevated. However, chrysin treatment significantly upregulated antioxidant defenses, including catalase, superoxide dismutase, ferric-reducing antioxidant power (FRAP), and glutathione (GSH). Administration of chrysin to aged rats led to a decline in both inflammatory biomarkers and insulin concentrations. These findings suggest that chrysin can alleviate oxidative stress, reduce lipid peroxidation, and influence inflammation and metabolism, highlighting its potential as an anti-aging therapeutic agent. This study underscores the potential of chrysin as a natural calorie restriction mimetic, mainly by maintaining redox balance by impacting longevity pathways and metabolic health.
Longevity Relevance Analysis
(4)
Chrysin treatment can alleviate oxidative stress and inflammation, suggesting its potential as an anti-aging therapeutic agent. The study addresses mechanisms related to aging and metabolic health, focusing on pathways that could influence longevity.
Ting Zhai, Patrizia Mazzucato, Catherine Ricciardi ...
· Advanced science (Weinheim, Baden-Wurttemberg, Germany)
· Department of Environmental Health, Harvard T.H. Chan School of Public Health, Boston, MA, 02115, USA.
· pubmed
Rare genetic DNA repair deficiency syndromes can cause immunodeficiency, neurological disorders, and cancer. In the general population, inter-individual variation in DNA repair capacity (DRC) influences susceptibility to cancer and age-related diseases. Genome-wide association st...
Rare genetic DNA repair deficiency syndromes can cause immunodeficiency, neurological disorders, and cancer. In the general population, inter-individual variation in DNA repair capacity (DRC) influences susceptibility to cancer and age-related diseases. Genome-wide association studies and functional analyses indicate that defects in multiple DNA repair pathways jointly increase disease risk, but previous technologies do not permit comprehensive population-level analysis. Fluorescence multiplex host cell reactivation (FM-HCR) assays now allow direct quantification of DRC across six major DNA repair pathways. DRC is assessed in phytohemagglutinin-stimulated primary lymphocytes from 56 healthy individuals, with reproducibility validated in 10 individuals across up to five independent blood draws. Generalized analytical pipelines are developed to systematically correct batch effects and experimental confounders. Significant inter-individual variation is observed across 10 reporter assays measuring distinct repair processes, with weak correlations between pathways suggesting independent disease susceptibility contribution. A complementary pipeline analyzing comet repair kinetics allows integration with previously reported comet data from the same individuals. This study underscores the sensitivity of FM-HCR assays in detecting subtle biological differences and establishes standardized methodologies for population research. The findings and open-source tools advance precision health by enabling comprehensive exploration of genetic and environmental determinants of DRC, supporting targeted interventions to maintain genomic integrity.
Longevity Relevance Analysis
(4)
The paper claims that inter-individual variation in DNA repair capacity influences susceptibility to age-related diseases and cancer. This research is relevant as it addresses the underlying mechanisms of DNA repair, which is a critical factor in aging and longevity, potentially leading to targeted interventions for maintaining genomic integrity.
Linxi Li, Anju Zuo, Ruoyu Yin ...
· Sarcopenia
· Department of General Practice, Qilu Hospital of Shandong University, Jinan, Shandong, China.
· pubmed
Sarcopenia, a degenerative condition marked by progressive skeletal muscle atrophy and impaired regeneration, is closely associated with aging, chronic inflammation, and disrupted proteostasis. While macroautophagy has been extensively studied in this context, little of the role ...
Sarcopenia, a degenerative condition marked by progressive skeletal muscle atrophy and impaired regeneration, is closely associated with aging, chronic inflammation, and disrupted proteostasis. While macroautophagy has been extensively studied in this context, little of the role of chaperone-mediated autophagy (CMA) has been known. In this study, we identified C1q/TNF-related protein 9 (CTRP9) as a novel autocrine myokine secreted by skeletal muscle that exerts dual protective functions-pro-differentiative and anti-atrophic. By using a replicative senescence model in C2C12 myoblasts, we observed that CTRP9 expression declined with cellular aging, accompanied by reduced levels of lysosome-associated membrane protein type 2A (LAMP2A), increased nucleotide-binding domain, leucine-rich-containing family, and pyrin domain-containing-3 (NLRP3) accumulation, and elevated interleukin-1β (IL-1β) secretion. Similar molecular signatures were detected in skeletal muscle tissues of CTRP9 knockout (KO) mice, further validating its role in vivo. Treatment with the biologically active globular domain of CTRP9 (gCTRP9) restored LAMP2A expression, enhanced CMA activity, and promoted selective degradation of NLRP3, thereby alleviating inflammatory stress and cellular senescence. Functionally, gCTRP9 restored myogenic differentiation markers (e.g., MYOD1) while suppressing atrophy-related genes (e.g., Fbxo32) and improving fusion potential and myotube integrity. In primary human myoblasts isolated from elderly individuals, CTRP9 and LAMP2A were significantly downregulated, and NLRP3 expression was increased-changes that were partially reversed upon gCTRP9 treatment. These findings collectively demonstrate that the CTRP9-LAMP2A-NLRP3 axis plays a pivotal role in regulating both muscle regeneration and maintenance. By targeting CMA-mediated NLRP3 degradation, CTRP9 offers a promising therapeutic strategy for combating sarcopenia through coordinated modulation of differentiation pathways and muscle atrophy.
Longevity Relevance Analysis
(4)
CTRP9 mitigates sarcopenia through the LAMP-2A/NLRP3 pathway, suggesting a potential therapeutic strategy for age-related muscle degeneration. The paper addresses a mechanism related to muscle regeneration and maintenance, which is crucial for combating sarcopenia, a significant age-related condition.
Weyna, A., Mullon, C., Lehmann, L.
· evolutionary biology
· University of Lausanne
· biorxiv
Many organisms undergo ontogeny, whereby individuals change in state (e.g.~in size, morphology, or condition) as they age. Understanding the evolution of traits influencing ontogeny is challenging because their fitness effects unfold across an individuals lifetime and may differ ...
Many organisms undergo ontogeny, whereby individuals change in state (e.g.~in size, morphology, or condition) as they age. Understanding the evolution of traits influencing ontogeny is challenging because their fitness effects unfold across an individuals lifetime and may differ between classes such as sexes. Here, we analyze selection on non-plastic traits (e.g., fixed resource allocation strategies) that determine the development of dynamical states throughout life (e.g., body size), with consequences for fecundity and survival in age- and class-structured populations. Using invasion analysis, we derive expressions for directional and quadratic selection that decompose into age- and class-specific components. This allows us to identify convergence stable trait values, assess whether they are uninvadable or potentially experience evolutionary branching, and pinpoint the age and class pathways through which correlational and disruptive selection act. Applying our results to a model of growth under size-mediated sexual selection, we show how developmental trade-offs and sex-specific constraints can generate disruptive selection on male growth and favour the evolution of alternative male life histories. More broadly, our results highlight how adaptation is mediated by the interaction of development and demography, and provide tools to investigate how conflicts across ages and classes influence senescence, sexual dimorphism, and the diversification of ontogenetic strategies.
Longevity Relevance Analysis
(4)
The paper claims that selection on non-plastic traits influences developmental trade-offs and sex-specific constraints, which can affect evolutionary pathways in age-structured populations. This research is relevant as it explores how evolutionary dynamics and trait development can impact longevity and senescence, providing insights into the underlying mechanisms of aging.
Mantica, G., Vedi, A., Tuval, A. ...
· cell biology
· University of Cambridge
· biorxiv
Clonal haematopoiesis (CH) arises from the expansion of hematopoietic stem cells (HSCs) carrying leukaemia-associated somatic mutations. CH is linked to pathological immune dysregulation and a greater risk of age-related inflammatory diseases. Yet, how CH mutations impact HSC dif...
Clonal haematopoiesis (CH) arises from the expansion of hematopoietic stem cells (HSCs) carrying leukaemia-associated somatic mutations. CH is linked to pathological immune dysregulation and a greater risk of age-related inflammatory diseases. Yet, how CH mutations impact HSC differentiation into immune effector cells remains understudied. Here, we report a single-cell resolution functional and multi-omic investigation of HSC clonal and differentiation dynamics in individuals with DNMT3A-R882 CH. DNMT3A-R882 reshapes the clonal architecture of haematopoiesis towards an aged phylogenetic structure. Functionally, DNMT3A-R882 HSCs produce decreased monocytic output but more abundant and mature neutrophil progeny compared to WT HSCs in the same individual. Whereas DNMT3A-R882 myeloid progenitors display attenuated inflammatory transcriptional programmes, DNMT3A-R882 mature neutrophils acquire proinflammatory and immunomodulatory features typical of maladaptive immunity and CH co-morbidities. Our findings, validated in humanised mice, identify aberrant DNMT3A-R882 HSC-driven neutropoiesis as a key link between CH, immune dysregulation and risk of inflammatory disease.
Longevity Relevance Analysis
(4)
DNMT3A-R882 mutations drive dysfunctional neutropoiesis from human hematopoietic stem cells, linking clonal hematopoiesis to immune dysregulation and inflammatory disease risk. The study addresses the underlying mechanisms of immune dysregulation associated with aging, which is relevant to understanding and potentially mitigating age-related diseases.
Katona, M., Yuan, S., Hall, R. ...
· cell biology
· University of Pittsburgh
· biorxiv
NADH-cytochrome b5 reductase 3 (CYB5R3) is a flavoprotein that governs nitric oxide (NO) signaling and supports NADPH oxidase 4-derived hydrogen peroxide production via coenzyme Q reduction in endothelium. While CYB5R3 expression is decreased during aging, the downstream conseque...
NADH-cytochrome b5 reductase 3 (CYB5R3) is a flavoprotein that governs nitric oxide (NO) signaling and supports NADPH oxidase 4-derived hydrogen peroxide production via coenzyme Q reduction in endothelium. While CYB5R3 expression is decreased during aging, the downstream consequences of CYB5R3 loss are not understood. Here, we demonstrate that depletion of CYB5R3 in primary human aortic endothelial cells activates a Ca2+ influx network characterized by the upregulation of calcium release-activated calcium (CRAC) channel subunits ORAI2 and ORAI3, as well as the non-selective cation channel transient receptor potential vanilloid 2 (TRPV2). When endoplasmic-reticulum Ca2+ stores were depleted, CYB5R3-deficient cells had increased Ca2+ entry through the plasma membrane, part of which was insensitive to classical store-operated Ca2+ entry (SOCE) blockers and was mediated by TRPV2, as demonstrated by genetic knockdown and pharmacologic inhibition. Mechanistically, loss of CYB5R3 increased Ca2+-dependent NO production through elevated CRAC channel activity, which oxidatively inhibited the protein tyrosine phosphatase non-receptor type 1 (PTPN1). This prevented TRPV2 dephosphorylation, thereby maintaining Janus kinase 1 (JAK1)-dependent channel activation downstream of SOCE. It also enhanced the responsiveness of TRPV2 to physiological heat stimuli. Thus, CYB5R3 normally acts as a brake, limiting NO-dependent PTPN1 oxidation and restraining TRPV2 activity. In vivo, endothelial-specific Cyb5r3 deletion enhanced acetylcholine-induced vasorelaxation and improved exercise capacity, demonstrating a physiological function for this pathway in vascular adaptation. Together, these findings identify a CYB5R3-NO-SOCE-PTPN1-TRPV2 signaling axis that couples endothelial redox balance to Ca2+ dynamics and vascular function.
Longevity Relevance Analysis
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The paper claims that CYB5R3 loss activates a signaling pathway that enhances vascular function through altered calcium dynamics. This research is relevant as it explores the mechanisms underlying endothelial dysfunction associated with aging, potentially addressing root causes of age-related vascular decline.
Ashwini Sansare, Madison Weinrich, Jessica A Bernard ...
· Postural Balance
· Department of Kinesiology and Sports Management, Texas A&M University, College Station, TX, USA.
· pubmed
The cerebellum undergoes significant age-related changes linked to poor balance in older adults. Although multi-session cerebellar iTBS combined with rehabilitation has been used in some clinical populations, its isolated effects in community-dwelling healthy older adults remain ...
The cerebellum undergoes significant age-related changes linked to poor balance in older adults. Although multi-session cerebellar iTBS combined with rehabilitation has been used in some clinical populations, its isolated effects in community-dwelling healthy older adults remain unknown, particularly in context of balance control and underlying cerebellar-motor cortex (M1) interactions. We tested whether a single-session, sham-controlled, cerebellar iTBS-only intervention could modulate balance and cerebellar-motor cortex (M1) interactions in community-dwelling older adults without neurological disease. The effects of cerebellar intermittent theta-burst stimulation (iTBS) on balance control and underlying cerebellar-motor cortex (M1) interactions in this population remain unclear. We investigated whether cerebellar iTBS led to [1] improved standing balance, and [2] changes in cerebellar-M1interactions measured using cerebellar brain inhibition (CBI) in older adults. Forty older adults were randomized to receive Active (n = 20) or Sham (n = 20) iTBS to the right lateral cerebellum. We measured postural sway (95% ellipse area of the center of pressure) during standing and CBI before iTBS and at multiple time points up to 30 min post-stimulation. Compared to sham, a single session of active iTBS reduced postural sway, with balance improvements sustained for at least 30 min post-stimulation. Cerebellar iTBS did not significantly alter CBI. Our results support the neuroplastic potential of the cerebellum as a viable target for therapeutic interventions aimed at improving balance in aging, potentially influencing circuits beyond direct cerebellar-M1 motor pathways.
Longevity Relevance Analysis
(4)
A single session of cerebellar iTBS can reduce postural sway in older adults, suggesting potential for improving balance control in aging. The study addresses a specific aspect of aging—balance control—by exploring a novel intervention that could enhance physical function and quality of life in older adults, which is relevant to longevity research.
Audre Preena Maria Sundar Raj, Gayathri Selvakumar, James Clement ...
· Human genomics
· Department of Biotechnology, Manonmaniam Sundaranar University, Tirunelveli, Tamil Nadu, 627012, India.
· pubmed
Aging, a complex biological process, entails sequential changes in organisms that elevate the risk of frailty, disease, and mortality, affecting individuals at the level of cellular, organ, and organism. This process is influenced by genetic diversity, socioeconomic status, healt...
Aging, a complex biological process, entails sequential changes in organisms that elevate the risk of frailty, disease, and mortality, affecting individuals at the level of cellular, organ, and organism. This process is influenced by genetic diversity, socioeconomic status, healthcare infrastructure, lifestyle choices, and cultural practices. Gerontology delves into the factors shaping longevity, aging processes, and aging from both evolutionary and individual perspectives. Centenarians and supercentenarians serve as models for studying exceptional longevity, offering insights into the aging process and resistance to age-related diseases. This research investigates common genetic variations (SNPs) shared among 3 centenarians and 18 supercentenarians, individuals aged 110 years or older. 754,520 SNPs were found to be common among all the 21 samples. Utilizing SNPnexus, a genetic variant annotation tool, we annotated coding variants and assessed potential disease susceptibilities associated with these variants. Ensembl was used as an annotation system, we annotated 1,607,122 variants, and found 11,348 coding variants. Among them, 4980 had non-synonymous variants, and 110 variants were observed to have deleterious effects. These deleterious SNPs were linked with 79 genes among them 16 novel variants were identified in 9 genes. The population frequency comparison using the 1000 Genomes Project and gnomAD revealed that a subset of these common, non-synonymous SNPs and deleterious SNPs had minor allele frequencies (MAF) below 1% or were absent entirely, suggesting potential rare variants specific to this cohort. In addition, we also found statistically significant (p < 0.05) 148 enriched pathways, among them the top enriched pathways such as extracellular matrix (ECM) remodeling, signal transduction, disease-associated pathways, sensory processing and metabolism of proteins and RNA. These preliminary findings may help prioritize candidate variants and genes for future studies on larger cohorts with appropriate controls can help in understanding the genetic basis of exceptional longevity.
Longevity Relevance Analysis
(4)
The paper identifies genetic variants associated with exceptional longevity in centenarians and supercentenarians. This research is relevant as it explores genetic factors that may contribute to the biological mechanisms of aging and longevity, rather than merely addressing age-related diseases.
Liang, L., Sheffield, P. E., Saint Fleur-Calixteb, R. ...
· occupational and environmental health
· Icahn School of Medicine at Mount Sinai
· medrxiv
Background: Occupational exposure to exhaust fumes, containing neurotoxic particulate matter and polycyclic aromatic hydrocarbons (PAHs), is associated with cardiopulmonary diseases, but its cognitive effects in aging workers remain insufficiently studied. Given increasing occupa...
Background: Occupational exposure to exhaust fumes, containing neurotoxic particulate matter and polycyclic aromatic hydrocarbons (PAHs), is associated with cardiopulmonary diseases, but its cognitive effects in aging workers remain insufficiently studied. Given increasing occupational longevity, understanding these risks is critical for dementia prevention. Methods: We analyzed data from 1,110 adults aged 60 years and older in the 2011 to 2012 National Health and Nutrition Examination Survey (NHANES), comparing cognitive performance between exposed (24%) and unexposed groups. Cognitive function was assessed using the Consortium to Establish a Registry for Alzheimers Disease Word List Learning Test (CERAD WL), Animal Fluency Test (AFT), and Digit Symbol Substitution Test (DSST). Distributed lag nonlinear models (DLNMs) evaluated nonlinear and time lagged effects of exposure duration. Results: Exposed workers were predominantly male (81.6% vs. 41.8%), had lower educational attainment (31.2% vs. 24.4% with less than high school education), and exhibited higher rates of smoking (65.0% vs. 48.6%) and excessive alcohol use (15.7% vs. 7.0%). Occupational exposure was associated with significant cognitive impairments in delayed memory (odds ratio [OR] = 2.55, 95% confidence interval [CI]: 1.61 4.05), verbal fluency (OR 2.41, 1.48 3.94), and processing speed (OR 1.95, 1.19 3.18). The DLNM analyses revealed a biphasic response: minimal effects at <20 years of exposure, but major declines after 30 years, with a 15 to 25 years latency period. Conclusion: Prolonged occupational exhaust fume exposure is associated with domain specific cognitive decline, particularly affecting memory and executive function. The dose response relationship underscores cumulative neurotoxicity, emphasizing the need for targeted protections for high-exposure workers.
Longevity Relevance Analysis
(4)
Prolonged occupational exposure to exhaust fumes is associated with significant cognitive impairments in older adults. The study addresses the cognitive effects of environmental factors on aging, which is crucial for understanding and potentially mitigating age-related cognitive decline.
Ziyue Yao, Zongmin Jiang, Xupeng Liu ...
· Advanced science (Weinheim, Baden-Wurttemberg, Germany)
· State Key Laboratory of Organ Regeneration and Reconstruction, Institute of Zoology, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Beijing Institute for Stem Cell and Regenerative Medicine, Beijing, 100101, P. R. China.
· pubmed
Exercise triggers molecular changes in skeletal muscles, but distinguishing immediate responses from secondary inter-organ interactions in muscle biopsies remains challenging. Here, this study differentiates human embryonic stem cells (hESCs) into induced skeletal muscle (iMusc) ...
Exercise triggers molecular changes in skeletal muscles, but distinguishing immediate responses from secondary inter-organ interactions in muscle biopsies remains challenging. Here, this study differentiates human embryonic stem cells (hESCs) into induced skeletal muscle (iMusc) cells to identify hypertrophic factors and generates a novel 3D human iMusc organoid model for studying the direct effects of exercise-like contractions. Transcriptomics profiling reveals iMusc organoids rapidly induced genes associated with calcium signaling, p38/MAPK, EGF/ErbB, and NGF pathways within 1 h, mimicking exercise responses in vivo. Proteomics profiling and in vivo validation reveal rapid activation of both AMPK and mTORC1 signaling, partly through increased Lamtor1 levels, resolving a paradox in exercise biology. Human muscle biopsy analyses reveal Lamtor1 decreases with aging, and increases with exercise. In vivo and organoid experiments both confirm Lamtor1's role in mTORC1-induced strength and AMPK-induced lipid metabolism. Overall, this 3D iMusc organoid model provides insights into primary contraction-induced changes and identifies Lamtor1 as a novel therapeutic target for exercise mimicry.
Longevity Relevance Analysis
(4)
The study identifies Lamtor1 as a novel therapeutic target for exercise mimicry in promoting muscle health. This research is relevant as it explores mechanisms that could potentially counteract age-related muscle decline and improve overall healthspan.
Gabriel Sturm, Kayley Hake, Austin E Y T Lefebvre ...
· Molecular biology of the cell
· University of California, San Francisco, San Francisco, CA, USA.
· pubmed
Mitochondrial networks exhibit remarkable dynamics that are driven in part by fission and fusion events. However, there are other reorganizations of the network that do not involve fission and fusion. One such exception is the elusive, "beads-on-a-string" morphological transition...
Mitochondrial networks exhibit remarkable dynamics that are driven in part by fission and fusion events. However, there are other reorganizations of the network that do not involve fission and fusion. One such exception is the elusive, "beads-on-a-string" morphological transition of mitochondria. During such transitions, the cylindrical tubes of the mitochondrial membrane transiently undergo shape changes to a string of "pearls" connected along thin tubes. These dynamics have been observed in many contexts and given disparate explanations. Here we unify these observations by proposing a common underlying mechanism based on the biophysical properties of tubular fluid membranes for which it is known that, under particular regimes of tension and pressure, membranes reach an instability and undergo a shape transition to a string of connected pearls. First, we use high-speed light-sheet microscopy to show that transient, short-lived pearling events occur spontaneously in the mitochondrial network in every cell type we have examined, including during T cell activation, neuronal firing, and replicative senescence. This high-temporal data reveals two distinct classes of spontaneous pearling, triggered either by ionic flux or cytoskeleton tension. We then induce pearling with chemical, genetic, and mechanical perturbations and establish three main physical causes of mitochondrial pearling, i) ionic flux producing internal osmotic pressure, ii) membrane packing lowering bending elasticity, and iii) external mechanical force increasing membrane tension. Pearling dynamics thereby reveal a fundamental biophysical facet of mitochondrial biology. We suggest that pearling should take its place beside fission and fusion as a key process of mitochondrial dynamics, with implications for physiology, disease, and aging.
Longevity Relevance Analysis
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The paper claims that mitochondrial pearling is a fundamental biophysical process that should be considered alongside fission and fusion in mitochondrial dynamics. The study explores mechanisms that could influence aging and age-related diseases through mitochondrial function, which is crucial for understanding the root causes of aging.
Lei Wang, Enrique I Oliver, Dario L D'Urso ...
· Neuroglia
· Department of Physiology and Biophysics, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
· pubmed
Aging depends on genetic and environmental factors, but the specific cell types and mechanisms that coordinate aging of the entire organism are not yet fully understood. Glial cells regulate ionic homeostasis, which is essential for neuronal function and survival. Here, we invest...
Aging depends on genetic and environmental factors, but the specific cell types and mechanisms that coordinate aging of the entire organism are not yet fully understood. Glial cells regulate ionic homeostasis, which is essential for neuronal function and survival. Here, we investigated the role of glial ion channel CLH-1, which is a glial pH regulator, in aging. We found that loss of
Longevity Relevance Analysis
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The loss of the ClC anion channel in glial cells leads to increased lifespan, health span, and stress resistance. This research addresses a specific mechanism related to aging by exploring the role of glial cells in regulating pH and ionic homeostasis, which are crucial for understanding the biological processes of aging.
Naomi R Genuth, Andrew Dillin
· Nature cell biology
· Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA.
· pubmed
Organisms must constantly respond to stress to maintain homeostasis, and the successful implementation of cellular stress responses is directly linked to lifespan regulation. In this Review we examine how three age-associated stressors-loss of proteostasis, oxidative damage and d...
Organisms must constantly respond to stress to maintain homeostasis, and the successful implementation of cellular stress responses is directly linked to lifespan regulation. In this Review we examine how three age-associated stressors-loss of proteostasis, oxidative damage and dysregulated nutrient sensing-alter protein synthesis. We describe how these stressors inflict cellular damage via their effects on translation and how translational changes can serve as both sensors and responses to the stressor. Finally, we compare stress-induced translational programmes to protein synthesis alterations that occur with age and discuss whether these changes are adaptive or deleterious to longevity and healthy ageing.
Longevity Relevance Analysis
(4)
The paper claims that alterations in translational regulation due to age-associated stressors can influence longevity and healthy aging. This research is relevant as it addresses the mechanisms of cellular stress responses and their direct link to lifespan regulation, which is central to understanding aging and potential interventions.
Yasuaki Mohri, Jialiang Nie, Hironobu Morinaga ...
· Nature cell biology
· Division of Aging and Regeneration, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
· pubmed
The exposome, an individual's lifelong environmental exposure, profoundly impacts health. Somatic tissues undergo functional decline with age, exhibiting characteristic ageing phenotypes, including hair greying and cancer. However, the specific genotoxins, signals and cellular me...
The exposome, an individual's lifelong environmental exposure, profoundly impacts health. Somatic tissues undergo functional decline with age, exhibiting characteristic ageing phenotypes, including hair greying and cancer. However, the specific genotoxins, signals and cellular mechanisms underlying each phenotype remain largely unknown. Here we report that melanocyte stem cells (McSCs) and their niche coordinately determine individual stem cell fate through antagonistic, stress-responsive pathways, depending on the type of genotoxic damage incurred. McSC fate tracking in mice revealed that McSCs undergo cellular senescence-coupled differentiation (seno-differentiation) in response to DNA double-strand breaks, resulting in their selective depletion and hair greying, and effectively protecting against melanoma. Conversely, carcinogens can suppress McSC seno-differentiation, even in cells harbouring double-strand breaks, by activating arachidonic acid metabolism and the niche-derived KIT ligand, thereby promoting McSC self-renewal. Collectively, the fate of individual stem cell clones-expansion versus exhaustion-cumulatively and antagonistically governs ageing phenotypes through interaction with the niche.
Longevity Relevance Analysis
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The paper claims that the fate of melanocyte stem cells under stress influences hair greying and melanoma development. This research is relevant as it explores the cellular mechanisms underlying aging phenotypes, specifically how stem cell fate decisions can impact aging and age-related diseases.
Zhou, Y., Lougheed, D., Cheung, W. ...
· genetics
· McGill University
· biorxiv
Telomeres are essential for maintaining genomic integrity and are associated with cellular aging and disease, yet the factors influencing their inheritance across generations remain poorly understood. Leveraging PacBio HiFi long-read sequencing and 75 parent-offspring trios (n = ...
Telomeres are essential for maintaining genomic integrity and are associated with cellular aging and disease, yet the factors influencing their inheritance across generations remain poorly understood. Leveraging PacBio HiFi long-read sequencing and 75 parent-offspring trios (n = 225) from the Genomic Answers for Kids program, we analyzed individual telomeres across chromosomes and their inheritance. Telomere length (TL) varied between chromosome arms in a way that was consistent in parents and offsprings, with average values ranging from 5000 to 8000 base pairs. Maternal and paternal TL together were a strong predictor of child TL (R2= 0.59). Notably, using telomeric variant repeats, we developed a tool that enabled allelic tracing for 53.3% of maternally and 49.9% of paternally inherited telomeres. In the child, paternally transmitted alleles were significantly longer than age-matched maternal ones ({Delta}mean = 409 bp, p = 2.6e-05), particularly when from older parents ({Delta}mean = 698 bp, p = 8.9e-05) and at chromosome arms with shorter average TL ({Delta}mean = 752 bp, p = 1.6e-06). These findings reveal parent-of-origin effects and heritable influences on TL, providing novel insights into telomere dynamics and their potential implications in age-related disease susceptibility.
Longevity Relevance Analysis
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The paper claims that telomere length inheritance patterns are influenced by parental origin and age, which may have implications for understanding age-related disease susceptibility. This research provides insights into the mechanisms of telomere dynamics, which are directly related to cellular aging and longevity.
Andrey A Parkhitko, Sudipta Pathak, Jay E Johnson ...
· Trends in endocrinology and metabolism: TEM
· Aging Institute of UPMC and the University of Pittsburgh, Pittsburgh, PA, USA; Division of Endocrinology and Metabolism, Department of Medicine, University of Pittsburgh, Pittsburgh, PA, USA. Electronic address: aparkhitko@pitt.edu.
· pubmed
Methionine restriction (MetR) attenuates the severity of numerous age-related diseases and extends lifespan across multiple species. Implementing MetR in humans remains challenging due to the low palatability of MetR diets, unfavorable side effects associated with continuous diet...
Methionine restriction (MetR) attenuates the severity of numerous age-related diseases and extends lifespan across multiple species. Implementing MetR in humans remains challenging due to the low palatability of MetR diets, unfavorable side effects associated with continuous dietary MetR, and interindividual variation in factors that can diminish its efficacy, including microbiota activity, compensatory effects from cysteine, and methionine transfer from neighboring cells. Several novel approaches that target methionine metabolism have been developed - including small molecules, synthetic biotics, and xenotopic tools - with some already translated into early-stage clinical trials. In this review, we discuss a variety of approaches that either produce or mimic MetR, as well as their potential applications for human healthspan improvement.
Longevity Relevance Analysis
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The paper discusses the potential of methionine restriction and its mimetics to improve human healthspan and mitigate age-related diseases. This research is relevant as it addresses mechanisms that could directly influence the aging process and lifespan extension rather than merely treating symptoms of age-related conditions.
Francesca Matteini, Roshana Thambyrajah, Sara Montserrat-Vazquez ...
· Blood
· The Bellvitge Institute for Biomedical Research (IDIBELL), L'Hospitalet de Llobregat (Barcelona), Spain.
· pubmed
Aged hematopoietic stem cells (HSCs) expand in clusters over time, while reducing their regenerative capacity and their ability to preserve the homeostasis of the hematopoietic system. The expression of Notch ligands in the bone marrow (BM) niche is essential for hematopoiesis. H...
Aged hematopoietic stem cells (HSCs) expand in clusters over time, while reducing their regenerative capacity and their ability to preserve the homeostasis of the hematopoietic system. The expression of Notch ligands in the bone marrow (BM) niche is essential for hematopoiesis. However, the impact of Notch signaling for adult HSC function and its involvement in HSC aging remains controversial. Here we show that Notch activation in young HSCs is not homogeneous, and it is triggered by sinusoidal expression of the Notch ligand Jagged2 (Jag2). Sinusoidal Jag2 deletion in young mice recapitulates the decrease in Notch activity observed in aged HSCs and alters HSC divisional symmetry and fate priming, promoting myeloid-biased HSCs (My-HSCs) expansion. Mechanistically, our data reveals that upon decreasing sinusoidal Jag2 expression, HSCs themselves upregulate Jag2, which cis-inhibits Notch signaling, resulting in the expansion of My-HSCs and in reduced hematopoietic regeneration. Collectively, these findings identify the crosstalk between BM niche-driven and HSC intrinsic features in regulating HSC fate priming and regenerative potential and reveal an extrinsic Notch trans-activation to intrinsic cis-inhibition switch underlying HSC aging.
Longevity Relevance Analysis
(4)
The paper claims that the switch from Notch trans-activation to cis-inhibition in hematopoietic stem cells (HSCs) is a mechanism underlying HSC aging. This research is relevant as it explores the intrinsic and extrinsic factors contributing to the aging process of HSCs, which is a critical aspect of understanding and potentially mitigating age-related decline in regenerative capacity.
Thashma Ganapathy, Juntao Yuan, Melody Yuen-Man Ho ...
· Inflammasomes
· Department of Health Technology and Informatics, The Hong Kong Polytechnic University, Hong Kong, China.
· pubmed
Trimethylamine N-oxide (TMAO) contributes to cardio-metabolic diseases, with hepatic flavin-containing monooxygenase 3 (FMO3) recognized as its primary source. Here we demonstrate that elevated adipocyte FMO3 and its derived TMAO trigger white adipose tissue (WAT) dysfunction and...
Trimethylamine N-oxide (TMAO) contributes to cardio-metabolic diseases, with hepatic flavin-containing monooxygenase 3 (FMO3) recognized as its primary source. Here we demonstrate that elevated adipocyte FMO3 and its derived TMAO trigger white adipose tissue (WAT) dysfunction and its related metabolic disorders in ageing. In adipocytes, ageing or p53 activation upregulates FMO3 and TMAO levels. Adipocyte-specific ablation of FMO3 attenuates TMAO accumulation in WAT and circulation, leading to enhanced glucose metabolism and energy and lipid homeostasis in ageing and obese mice. These improvements are associated with reduced senescence, fibrosis and inflammation in WAT. Proteomics analysis identified TMAO-interacting proteins involved in inflammasome activation in adipocytes and macrophages. Mechanistically, TMAO binds to the central inflammasome adaptor protein ASC, promoting caspase-1 activation and interleukin-1β production. Our findings uncover a pivotal role for adipocyte FMO3 in modulating TMAO production and WAT dysfunction by promoting inflammasome activation in ageing via an autocrine and paracrine manner.
Longevity Relevance Analysis
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Elevated adipocyte FMO3-derived TMAO promotes white adipose tissue dysfunction and metabolic disorders in ageing through inflammasome activation. The paper addresses mechanisms underlying metabolic dysfunction in ageing, which is a root cause of age-related diseases.
Patel, T., Schwarz, R., Riege, K. ...
· bioinformatics
· Leibniz Institute on Aging - Fritz Lipmann Institute
· biorxiv
Methylation-based epigenetic clocks are among the most accurate tools for predicting chronological age. Although DNA methylation (DNAm) at genomic CpG sites is linked to various regulatory mechanisms, the biological interpretability of epigenetic clocks remains surprisingly limit...
Methylation-based epigenetic clocks are among the most accurate tools for predicting chronological age. Although DNA methylation (DNAm) at genomic CpG sites is linked to various regulatory mechanisms, the biological interpretability of epigenetic clocks remains surprisingly limited. One primary mechanism by which DNAm is thought to influence gene regulation is by modulating transcription factor binding activity. In this study, we examine established epigenetic clocks to assess the regulatory potential of their predictive CpGs during the aging process. Our analysis reveals that generally most CpG sites used by epigenetic clocks do not overlap known transcription factor binding sites (TFBSs), indicating that changes in TFBS dynamics may not account for prediction accuracy of these models. On the other hand, by identifying age-associated CpGs that overlap TFBSs, we identified transcription factors that may be involved in the aging process. Specifically, the TFBSs of ZBED1, NFE2, CEBPB, FOXP1, EGR1, SP1, PAX5, and MAZ were particularly enriched for age-associated CpGs, while RBPJ, NFIC, RELA, IKZF1, STAT3, and USF2 were significantly protected against methylation changes. By focusing on TFBS-associated CpGs, combined with additional feature selection and engineering steps, we developed an alternative, TFMethyl Clock model, outperforming several existing approaches. Target genes of model-selected, age-predictive CpGs are enriched in the interleukin-1{beta} production and long-chain fatty acid metabolism pathways. In contrast, these CpGs themselves are enriched mainly at binding sites of NR2C2 TF. Furthermore, approximately three-fourths of the target genes downstream of age-predictive CpGs exhibit significant age-related changes, suggesting that our approach captures deeper insights into possible methylation-driven biological aging processes. Our findings demonstrate that incorporating regulatory loci into the design of epigenetic predictors may provide mechanistic insights into the aging process while maintaining or even improving the predictive power.
Longevity Relevance Analysis
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The paper claims that incorporating transcription factor binding sites into epigenetic age estimation models can enhance predictive accuracy and provide insights into biological aging processes. This research is relevant as it addresses the underlying mechanisms of aging through DNA methylation and transcription factor interactions, potentially contributing to a deeper understanding of the biological processes that drive aging.
Yuxin Deng, Xin He, Juzheng Peng ...
· Aging
· Scientific Research Center, The Seventh Affiliated Hospital of Sun Yat-sen University, Shenzhen, Guangdong, China.
· pubmed
Population aging is an escalating global phenomenon, wherein age-related alterations in the human immune system exacerbate the susceptibility to diseases including infections and autoimmune disorders. Secondary lymphoid organs (SLOs) are key locations for the execution of immunol...
Population aging is an escalating global phenomenon, wherein age-related alterations in the human immune system exacerbate the susceptibility to diseases including infections and autoimmune disorders. Secondary lymphoid organs (SLOs) are key locations for the execution of immunological responses by mature immune cells; however, age-related changes in SLOs remain relatively understudied. To address this gap, this study employed comprehensive approaches including single-cell RNA sequencing (scRNA-seq) data analysis, immunofluorescence staining, flow cytometry, and morphological analysis, to clarify the age-related alterations in SLOs in mice. The results demonstrated that aging caused senescent immune cells to accumulate and subpopulations to reorganize, with a decrease in the proportion of naïve T cells, whilst an increase in regulatory T (Treg) cells, cytotoxic T lymphocytes (CTLs), and exhausted T (Tex) cells. Notably, CD4
Longevity Relevance Analysis
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The paper claims that aging leads to the accumulation of senescent immune cells and a reorganization of immune cell subpopulations in secondary lymphoid organs. This research is relevant as it addresses fundamental changes in the immune system associated with aging, which could inform strategies for mitigating age-related diseases and improving longevity.
Ian J Deary, Sarah E Harris, Tom C Russ ...
· Molecular psychiatry
· Lothian Birth Cohorts, Department of Psychology, University of Edinburgh, Edinburgh, United Kingdom. i.deary@ed.ac.uk.
· pubmed
Variation in the gene for apolipoprotein E (APOE) is one of the few variables that is associated with individual differences in age-related cognitive decline in humans. Therefore, it is important to understand the conditions that affect the strength of its effect. Here we examine...
Variation in the gene for apolipoprotein E (APOE) is one of the few variables that is associated with individual differences in age-related cognitive decline in humans. Therefore, it is important to understand the conditions that affect the strength of its effect. Here we examine how the effect size of APOE variation (possession of one or more e4 alleles) on a test of general cognitive ability changes with age from 11-90 years. The data are from the Lothian Birth Cohorts of 1936 and 1921 who took the same cognitive test (the Moray House Test No. 12) at, respectively, ages 11 (N = 954), 70 (N = 1001), 76 (N = 636), 79 (N = 471), and 11 (N = 483), 79 (N = 533), 87 (N = 198), 90 (N = 120). The standardised absolute effect of APOE e4 on general cognitive ability was about zero at ages 11 (beta < 0.05) and 70 (beta ≤ 0.025) and increased linearly to beta = 0.30 (p < 0.001) at age 90. The effect sizes were minimally affected by adjusting for medical conditions (hypertension, diabetes, cardiovascular disease, stroke). However, the results were less robust to removing those participants who developed dementia; effect sizes were reduced by about a third to a half, and were largely non-significant. The results suggest that the negative effect of APOE e4 on cognitive functioning becomes greater with age; this urges more work to understand the mechanisms by which e4 status renders the older person's brain increasingly vulnerable to cognitive decline and dementia.
Longevity Relevance Analysis
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The paper claims that the negative effect of APOE e4 on cognitive functioning increases with age. This research is relevant as it explores genetic factors contributing to cognitive decline, which is a significant aspect of aging and age-related diseases.
Tomaio, J. N., Fleury, S., Bilder, A. ...
· neuroscience
· Advanced Science Research Center at Graduate Center, CUNY
· biorxiv
The lateral entorhinal cortex (LEC) is selectively vulnerable to age-related decline and is essential for novelty detection and episodic memory. While dopaminergic (DAergic) input is known to modulate LEC function, how aging impacts this circuitry remains unclear. Here, we used t...
The lateral entorhinal cortex (LEC) is selectively vulnerable to age-related decline and is essential for novelty detection and episodic memory. While dopaminergic (DAergic) input is known to modulate LEC function, how aging impacts this circuitry remains unclear. Here, we used two viral labeling strategies to investigate projections from the ventral tegmental area (VTA) to the LEC. First, we employed an INTRSECT dual-recombinase approach in TH-Flp::VGLUT2-Cre mice to selectively label dopamine-only (DA-only) and dopamine-glutamate co-releasing (DA-GLU) neurons. Next, we used a DAT-Cre-driven ChR2-YFP strategy to broadly label all DA axons. We found that both DA-only and DA-GLU populations innervate the LEC. With age, we observed a selective reduction in tyrosine hydroxylase (TH) signal within DA axons in the LEC, despite preserved axonal structure as revealed by YFP labeling. VGLUT2 signal within DA-GLU terminals appeared less affected. In the VTA, TH+ neuron density declined with age, with distinct spatial patterns along the anterior-posterior axis. These findings reveal an age-related vulnerability of DAergic projections to the LEC and suggest a circuit-level mechanism may contribute to memory impairments in aging.
Longevity Relevance Analysis
(4)
The paper claims that age-related vulnerability in dopamine-glutamate projections to the lateral entorhinal cortex may contribute to memory impairments in aging. This research is relevant as it investigates the underlying mechanisms of age-related cognitive decline, which is a critical aspect of understanding and potentially addressing the root causes of aging.
Ruixuan Yu, Lei Miao, Jinchao Wang ...
· Sarcopenia
· Department of Spine Surgery, Beijing Jishuitan Hospital, National Centre for Orthopaedics, Capital Medical University, Beijing, China.
· pubmed
Sarcopenia and obesity, two prevalent metabolic disorders in aging populations, often coexist and share overlapping pathophysiological mechanisms, yet the molecular mechanisms underlying their comorbidity remain elusive. This study aimed to identify key gene expression signatures...
Sarcopenia and obesity, two prevalent metabolic disorders in aging populations, often coexist and share overlapping pathophysiological mechanisms, yet the molecular mechanisms underlying their comorbidity remain elusive. This study aimed to identify key gene expression signatures and pathways underlying their comorbidity through integrative transcriptomic and bioinformatics analyses. Gene expression datasets from sarcopenia (GSE111016, skeletal muscle) and obesity (GSE152991, adipose tissue) were downloaded from the GEO database. Differentially expressed genes (DEGs) were identified using the limma package, and 208 common differentially expressed genes (CDEGs) were selected via Venn diagram intersection. Functional enrichment analyses (GO and KEGG) were performed to explore shared biological processes and pathways. A protein-protein interaction (PPI) network was constructed using STRING and Cytoscape, and key CDEGs were identified via ten topological algorithms (e.g., MCC, Degree) in the CycloHubba plugin. Pearson correlation analysis and qPCR were used to validate gene co-expression patterns and expression levels in tissue samples. GO and KEGG analyses revealed that CDEGs were significantly enriched in mitochondrial oxidative phosphorylation, electron transport chain, and thermogenesis pathways, with overlap in neurodegenerative disease pathways. The PPI network and multi-algorithm integration identified four key CDEGs: SDHB, SDHD, ATP5F1A, and ATP5F1B, all of which are components of mitochondrial respiratory chain complexes. These genes exhibited strong positive correlations (r > 0.86, p < 10⁻¹²) in both datasets and were significantly downregulated in sarcopenia and obesity tissues, as validated by qPCR. This study confirms mitochondrial dysfunction, particularly impaired oxidative phosphorylation, as a common pathological mechanism linking sarcopenia and obesity. The key genes SDHB, SDHD, ATP5F1A, and ATP5F1B represent potential therapeutic targets for managing these comorbid metabolic disorders. Future research should explore their functional roles in energy metabolism and cross-tissue crosstalk to develop targeted interventions.
Longevity Relevance Analysis
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Mitochondrial dysfunction, particularly impaired oxidative phosphorylation, is identified as a common pathological mechanism linking sarcopenia and obesity. The study addresses underlying molecular mechanisms of comorbid metabolic disorders associated with aging, which is relevant to understanding and potentially mitigating age-related decline.
Ana Hernández de Sande, Tanja Turunen, Maria Bouvy-Liivrand ...
· MicroRNAs
· School of Medicine, University of Eastern Finland, 70200, Kuopio, North-Savo, Finland.
· pubmed
Regulatory networks controlling aging and disease trajectories remain incompletely understood. MicroRNAs (miRNAs) are a class of regulatory non-coding RNAs that contribute to the regulation of tissue homeostasis by modulating the stability and abundance of their target mRNAs. MiR...
Regulatory networks controlling aging and disease trajectories remain incompletely understood. MicroRNAs (miRNAs) are a class of regulatory non-coding RNAs that contribute to the regulation of tissue homeostasis by modulating the stability and abundance of their target mRNAs. MiRNA genes are transcribed similarly to protein-coding genes which has facilitated their annotation and quantification from bulk transcriptomes. Here, we show that droplet, spatial, and plate-based single-cell RNA-sequencing platforms can be used to decipher miRNA gene signatures at cellular resolution to reveal their expression dynamics in vivo.
Longevity Relevance Analysis
(4)
The paper claims to reveal miRNA gene signatures and their expression dynamics in immune cell subpopulations during aging and atherosclerosis. This research is relevant as it explores the regulatory mechanisms of miRNAs in the context of aging and disease, potentially contributing to understanding the biological processes underlying aging and age-related diseases.
Quintas, I., Bontempi, D., Bors, S. ...
· ophthalmology
· University of Lausanne
· medrxiv
Cardiorespiratory fitness (CRF) is a powerful predictor of cardiovascular events and overall mortality, often surpassing traditional risk factors in prognostic value. However, its clinical use remains limited because current assessments rely on specialized equipment, trained pers...
Cardiorespiratory fitness (CRF) is a powerful predictor of cardiovascular events and overall mortality, often surpassing traditional risk factors in prognostic value. However, its clinical use remains limited because current assessments rely on specialized equipment, trained personnel, and lengthy procedures that are often impractical for broad or routine application, especially in at-risk populations. Because CRF is closely tied to vascular health, surrogate measures that capture vascular features may offer a practical alternative for its estimation. Retinal Color Fundus Images (CFIs) provide a non-invasive window into systemic vascular health and have already demonstrated their utility in predicting cardiovascular risk factors and diseases, yet CFIs have yet to be explored for their potential to predict CRF. In this study, we develop RetFit, a novel CRF estimator derived from CFIs by leveraging state-of-the-art vision transformers. RetFit enables a non-invasive, easy-to-acquire CRF proxy, addressing some of the limitations inherent to standard CRF measures and linking retinal imaging to the cardiovascular system. We evaluated RetFit's clinical relevance by analyzing its associations with cardiovascular risk factors, disease outcomes, and exploring its genetic architecture, benchmarking it against a submaximal-exercise-test CRF (SETCRF) estimate. We find that RetFit is prognostic of both cardiovascular events (hazard ratios as low as 0.878, 95%CI 0.856 to 0.901, p<0.001) and overall mortality (hazard ratios as low as 0.780, 95%CI 0.754 to 0.801, p<0.001) and significantly associates with the majority of disease states and risk factors explored within our analysis. Although RetFit and SETCRF shared a moderate phenotypic correlation with each other (r=0.45), their significant genetic associations were disjoint. Interpretability analyses revealed that RetFit's predictions are driven by the retinal vasculature, with the number of arterial bifurcations showing the strongest association with RetFit ({beta}=0.287, 95%CI 0.263 to 0.311, p<0.001). These findings highlight the potential of retinal imaging as a scalable, cost-effective, and accessible alternative for CRF estimation, supporting its use in large-scale screening and risk stratification in both clinical and public health contexts.
Longevity Relevance Analysis
(4)
RetFit serves as a novel estimator of cardiorespiratory fitness derived from retinal imaging, linking vascular health to cardiovascular risk and mortality. The paper is relevant as it explores a non-invasive method to assess a key predictor of overall health and longevity, potentially aiding in early detection and prevention of age-related diseases.
Di Iorio, A., Pellegrino, R., Paganelli, R. ...
· geriatric medicine
· \"G d\'Annunzio\" University
· medrxiv
Age-related muscle dysfunction is a major contributor to disability, frailty, and poor clinical outcomes in older adults. Skeletal Muscle Function Deficit (SMFD) framework integrates multiple domains muscle mass, quality, strength, and power to capture a broader spectrum of age-r...
Age-related muscle dysfunction is a major contributor to disability, frailty, and poor clinical outcomes in older adults. Skeletal Muscle Function Deficit (SMFD) framework integrates multiple domains muscle mass, quality, strength, and power to capture a broader spectrum of age-related muscle dysfunction. The primary aims of these analyses are to develop and validate a composite SMFD score and evaluate its association with key geriatric outcomes in older adults. This study used data from the nCHIANTI study, including 1,035 participants and 3,196 total assessments. The SMFD score was computed by assigning quintile-based values of muscle area, density, strength, and lower limb power. Associations with adverse health outcomes, and major chronic diseases were analyzed using mixed-effects models. The SMFD score declined over time and was associated with lower risk of BADL (OR 0.57), IADL (OR 0.70), frailty (OR 0.72), poor performance (OR 0.68), hospitalization (OR 0.96), and falls (OR 0.96). Higher SMFD scores were also inversely associated with Parkinson s disease, stroke, and hip osteoarthritis. The SMFD score is a valid, multidimensional measure that predicts adverse outcomes in older adults more effectively than traditional sarcopenia, dynapenia, and powerpenia. It holds promise for use in clinical assessment, risk stratification, and targeted interventions.
Longevity Relevance Analysis
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The paper presents a composite Skeletal Muscle Function Deficit score that predicts adverse health outcomes in older adults. This research is relevant as it addresses a critical aspect of age-related muscle dysfunction, which is a significant contributor to frailty and disability in the aging population, thereby potentially informing interventions that could improve longevity and quality of life.
Chengying Xu, Zhimei Qiu, Qing Guo ...
· Cell death discovery
· Department of Cardiology, Affiliated Hospital of Zunyi Medical University, Zunyi, China.
· pubmed
The incidence of cardiovascular diseases rises significantly with age, making it one of the leading causes of death and disability worldwide, and cellular senescence plays a crucial role in this process. Cellular senescence constitutes a salient feature of organismal aging and st...
The incidence of cardiovascular diseases rises significantly with age, making it one of the leading causes of death and disability worldwide, and cellular senescence plays a crucial role in this process. Cellular senescence constitutes a salient feature of organismal aging and stands as an independent risk factor for a range of cardiovascular diseases, encompassing hypertension, atherosclerosis, myocardial infarction, heart failure, and arrhythmia. This comprehensive review endeavors to comprehensively delineate the intricate regulatory mechanisms underlying cellular senescence and its attendant biological implications, while elucidating the profound implications of this process on the initiation and progression of cardiovascular diseases. Finally, we will delve into a spectrum of targeted interventions aimed at cellular senescence, specifically focusing on eliminating the accumulation of senescent cells during disease progression or inhibiting the inherent cellular senescence processes. Our ultimate goal is to mitigate or postpone the onset of diseases that are intricately linked to cellular senescence. A profound comprehension and rigorous investigation into the regulatory mechanisms of cellular senescence and their intricate interrelationships hold significant potential to furnish invaluable scientific evidence for the prevention and therapeutic strategies against cardiovascular diseases.
Longevity Relevance Analysis
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Cellular senescence is a key factor in the development and progression of cardiovascular diseases. The paper addresses the underlying mechanisms of cellular senescence, which is directly related to aging and its impact on age-related diseases, thus contributing to the understanding of longevity.
Selim Chaib, Allyson K Palmer, Saranya P Wyles ...
· Nature reviews. Endocrinology
· Center for Advanced Gerotherapeutics, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA, USA.
· pubmed
Translational research on cellular senescence has led to numerous early-phase clinical trials targeting senescent cells to treat, prevent or alleviate multiple disorders and diseases, including metabolic diseases and their comorbidities. Cellular senescence is a cell fate that oc...
Translational research on cellular senescence has led to numerous early-phase clinical trials targeting senescent cells to treat, prevent or alleviate multiple disorders and diseases, including metabolic diseases and their comorbidities. Cellular senescence is a cell fate that occurs in response to stressors, including metabolic disruptions, and is one of the hallmarks (or pillars) of ageing. In their senescent state, cells cease proliferation and can develop a senescence-associated secretory and metabolic phenotype that contributes to the pathogenesis of metabolic dysfunction associated with obesity and ageing. Metabolic stress, which is central to the development of metabolic diseases, can trigger cellular senescence, thereby enabling a vicious cycle that exacerbates metabolic dysfunction. Therapies targeting senescent cells (senotherapeutics), either alone or in combination with other gerotherapies or lifestyle interventions, hold great promise for addressing the ongoing obesity epidemic and the need for improved therapies to prevent and treat metabolic diseases and their complications and comorbidities. In this Review, we discuss novel senotherapeutics, including challenges related to the translation of these therapies and the need to establish gerodiagnostic biomarkers to track the elimination of senescent cells, define eligibility and measure efficacy, as well as considerations for clinical trial design and execution.
Longevity Relevance Analysis
(4)
Therapies targeting senescent cells may alleviate metabolic diseases and their comorbidities. The paper addresses cellular senescence as a root cause of metabolic dysfunction, linking it to aging and proposing therapeutic strategies that could potentially mitigate age-related diseases.
Yadav, A., Alvarez, K., Yip, K. ...
· bioinformatics
· SANFORD BURNHAM PREBYS
· biorxiv
Tissue structure, the organization of cells, vasculature and extracellular matrix, determines organ function. Yet how tissue structure changes with aging remains largely unknown. Current aging research primarily focuses on molecular changes, missing this structural dimension. Her...
Tissue structure, the organization of cells, vasculature and extracellular matrix, determines organ function. Yet how tissue structure changes with aging remains largely unknown. Current aging research primarily focuses on molecular changes, missing this structural dimension. Here, we present PathStAR, Pathology based Structural Aging Rate, the first computational framework that captures when and how tissue structure changes during aging from histopathology images. We applied it to 25,306 postmortem tissues covering 40 tissue types from individuals aged 21 - 70, connecting structural aging to molecular data, health records and genotype data. Without any training on chronological age, PathStAR captured non-linear functional decline of ovary, undetectable by bulk-molecular profiling. Applying it across 40 tissues, it revealed that structural aging occurs through discrete phases of rapid change (accelerated periods), with tissue-specific trajectories following three patterns: Early Aging Tissues (vascular system with major changes during the 30s), Late Aging Tissues (uterus and vagina with major changes during menopause (50s)) and Biphasic Aging Tissues (digestive, male reproductive tissues, and ovary with two periods of major changes). During these accelerated phases, most tissues exhibited shared aging hallmarks of inflammation and energy production decline, coupled with disruption of pathways governing their specialized functions. Cross-organ analysis revealed coordinated aging within organ systems and an unexpected link between digestive and male reproductive tissues. We next identified 123 germline variants associated with organ-specific accelerated structural aging, including SIRT6 variants linked to accelerated vascular decline. Finally, individuals with systemic autoimmune disease, as well as tissues with classical aging pathologies (atrophy, calcification, fibrosis), showed elevated structural aging scores. We demonstrate that structural aging is measurable from histology scans and provide the first systematic framework for studying it, revealing organ-specific aging processes.
Longevity Relevance Analysis
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The paper presents a novel computational framework, PathStAR, that quantifies structural aging in human tissues and identifies genetic determinants associated with accelerated aging processes. This research is relevant as it addresses the mechanisms of aging at a structural level, potentially leading to insights into the root causes of aging and age-related diseases.
Song, J., Rindone, A. N., Guan, Y. ...
· bioengineering
· Duke University
· biorxiv
Identifying the drivers of cellular senescence that contribute to the decline in tissue function related to aging- and disease is critical for developing restorative interventions. Here, we investigated how increased mechanical stress from extracellular matrix (ECM) stiffening sh...
Identifying the drivers of cellular senescence that contribute to the decline in tissue function related to aging- and disease is critical for developing restorative interventions. Here, we investigated how increased mechanical stress from extracellular matrix (ECM) stiffening shapes endothelial cell (EC) senescence. We developed a 3D human in vitro model that decouples mechanical stress from inflammatory or biochemical inputs, enabling the study of senescence responses to tissue stiffening alone. We found that matrix stiffening induces an EC senescence phenotype with elevated p16/p21 and an immunomodulatory senescence-associated secretory phenotype (SASP), in the absence of inflammatory signals. This mechano-induced senescence state engaged a Notch-JNK-FOS signaling axis, and pharmacologic inhibition of Notch attenuated stiffness-induced senescence. Supporting the translational relevance of this mechanism, analysis of fibrotic capsule tissue from patients with synthetic breast implants, a model of localized, mechanically driven fibrosis, revealed increased p16+Notch1+ endothelial populations. Complementary single-cell RNA sequencing data confirmed their enrichment in Notch/JNK- and SASP-related gene programs. Together, these findings define vascular senescence as a mechanosensitive process and identify tissue stiffening as an upstream aging signal. Our work offers a human-relevant platform for studying targetable stages of endothelial mechanoaging.
Longevity Relevance Analysis
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Matrix stiffness induces endothelial cell senescence through a Notch-JNK-FOS signaling axis. The study addresses a mechanistic driver of cellular senescence related to aging, highlighting the role of mechanical stress in vascular aging and potential therapeutic targets.
Hashan Jayarathne, Dulmalika Herath Manchanayake, Ryan Sullivan ...
· Aging cell
· Department of Biological Sciences, Wayne State University, Detroit, Michigan, USA.
· pubmed
Aging is the strongest risk factor for cognitive decline and Alzheimer's disease (AD), yet the mechanisms underlying brain aging and their modulation by pharmacological interventions remain poorly defined. The hippocampus, essential for learning and memory, is particularly vulner...
Aging is the strongest risk factor for cognitive decline and Alzheimer's disease (AD), yet the mechanisms underlying brain aging and their modulation by pharmacological interventions remain poorly defined. The hippocampus, essential for learning and memory, is particularly vulnerable to metabolic stress and inflammation. Canagliflozin (Cana), an FDA-approved sodium-glucose co-transporter 2 inhibitor (SGLT2i) for type 2 diabetes, extends lifespan in male but not female mice, but its impact on brain aging is unknown. Here, we used a multi-omics strategy integrating transcriptomics, proteomics, and metabolomics to investigate how chronic Cana treatment reprograms brain aging in genetically diverse UM-HET3 mice. In males, Cana induced mitochondrial function, insulin and cGMP-PKG signaling, and suppressed neuroinflammatory networks across all molecular layers, resulting in improved hippocampal-dependent learning and memory. In females, transcriptional activation of neuroprotective pathways did not translate to protein or metabolite-level changes and failed to rescue cognition. In the 5xFAD AD model, Cana reduced amyloid plaque burden, microgliosis, and memory deficits in males only, despite comparable peripheral glucose improvements in both sexes. Our study reveals sex-specific remodeling of hippocampal aging by a clinically available SGLT2i, with implications for AD pathology and lifespan extension, and highlights Cana's potential to combat brain aging and AD through sex-specific mechanisms.
Longevity Relevance Analysis
(4)
Canagliflozin reprograms brain aging and attenuates Alzheimer's-like pathology in a sex-specific manner. The study investigates a pharmacological intervention that targets mechanisms of brain aging and cognitive decline, which aligns with the goals of longevity research.
Yao Zhang, Jiale Wang, Di Hua ...
· Journal of orthopaedic translation
· Department of Orthopaedic Surgery, Orthopaedic Institute, The First Affiliated Hospital, Suzhou Medical College, Soochow University, Suzhou, Jiangsu, China.
· pubmed
Degenerative skeletal diseases, including osteoporosis, osteoarthritis, and intervertebral disc degeneration, are prevalent age-related conditions characterized by progressive tissue degeneration and functional decline. Histone modifications are covalent modifications of histone ...
Degenerative skeletal diseases, including osteoporosis, osteoarthritis, and intervertebral disc degeneration, are prevalent age-related conditions characterized by progressive tissue degeneration and functional decline. Histone modifications are covalent modifications of histone residues, catalyzed by specific enzymes, that modulate chromatin architecture and transcriptional activity. Accumulating evidence highlights the critical involvement of histone modifications in orchestrating disease-associated transcriptional programs. In osteoporosis, histone modifications regulate osteoblast and osteoclast differentiation, thereby disrupting bone homeostasis. In osteoarthritis, they drive the expression of matrix-degrading enzymes in chondrocytes, contributing to cartilage degradation. In intervertebral disc degeneration, they are implicated in nucleus pulposus cell senescence, apoptosis, and extracellular matrix degradation. This review summarizes the distinct mechanistic roles of histone modifications across these conditions and explores the therapeutic potential of targeting histone-modifying enzymes, underscoring epigenetic regulation as a promising strategy for precision intervention in degenerative skeletal diseases. The translational potential of this article: This review comprehensively explores the role of histone modifications in degenerative skeletal diseases and evaluates the potential of histone-modifying enzyme inhibitors as therapeutic targets. These insights provide new strategies and directions for the treatment of degenerative skeletal diseases.
Longevity Relevance Analysis
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Histone modifications play a critical role in the pathogenesis of degenerative skeletal diseases, suggesting potential therapeutic targets for intervention. The paper addresses the underlying mechanisms of age-related degenerative diseases, which aligns with the goal of understanding and potentially mitigating the effects of aging.
Lakshmi B Reddy, Milton H Saier
· Microbial physiology
· Not available
· pubmed
The human microbiome is a dynamic, polymicrobial ecosystem that plays an essential role in nutrition, immune development, barrier integrity, and host physiology, acting as a mutualistic partner under balanced conditions. However, its ecological complexity, genetic adaptability th...
The human microbiome is a dynamic, polymicrobial ecosystem that plays an essential role in nutrition, immune development, barrier integrity, and host physiology, acting as a mutualistic partner under balanced conditions. However, its ecological complexity, genetic adaptability through horizontal gene transfer, and interactions with other prokaryotes as well as protozoan and metazoan parasites can transform commensals into pathobionts, resulting in weakened host's barriers, immunity declines with the progression of age, and community composition shifts toward dysbiosis. Factors such as diet, genetics, aging, immune-senescence, impaired autophagy, and environmental exposure, all influence this delicate balance, determining whether the microbiome remains protective or becomes an opportunistic source of inflammation and disease. This review focuses on the study of the intestinal microbiome in humans. Maintaining microbiome homeostasis is promoted through (a) dietary diversity, (b) limited antimicrobial use, (c) use of probiotics, (d) support for gut barrier function, and (e) healthy lifestyle improvements. These actions and considerations are critical to prevent the emergence of pathogenic states and preserving the microbiome's vital role in host health throughout life.
Longevity Relevance Analysis
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Maintaining microbiome homeostasis is critical for preserving host health throughout life. The paper discusses the role of the microbiome in aging and its potential to influence age-related health outcomes, making it relevant to longevity research.
Jinfeng Pei, Guohui Wang, Minwei Yang ...
· Peptides
· Department of Pain Management, the First Hospital of Shanxi Medical University, Taiyuan, Shanxi, 030001, China. Electronic address: peijf3315@163.com.
· pubmed
The pro-inflammatory cytokine TNF-α plays a crucial role in promoting cellular senescence in chondrocytes, contributing to the pathological progression of osteoarthritis (OA). Relaxin-2, a biologically active peptide hormone with diverse effects, has been investigated for its pot...
The pro-inflammatory cytokine TNF-α plays a crucial role in promoting cellular senescence in chondrocytes, contributing to the pathological progression of osteoarthritis (OA). Relaxin-2, a biologically active peptide hormone with diverse effects, has been investigated for its potential protective role against TNF-α-induced cellular senescence in human primary chondrocytes. In this study, human primary chondrocytes were exposed to TNF-α (10ng/mL) with and without the presence of recombinant human relaxin-2 (rh relaxin-2). SA-β-gal staining indicated that rh relaxin-2 effectively mitigated TNF-α-induced cellular senescence in these cells. Furthermore, rh relaxin-2 enhanced telomerase activity and prevented cell cycle arrest at the G0/G1 phase induced by TNF-α. Additionally, rh relaxin-2 reduced the expression levels of plasminogen activator Inhibitor-1 (PAI-1) and p21, key regulators of cellular senescence. Interestingly, TNF-α increased K382 acetylation of p53 but decreased SIRT1 expression. Notably, knocking down SIRT1 negated the protective effects of rh relaxin-2 on cellular senescence, suggesting that SIRT1 is involved in mediating the protective effects of rh relaxin-2. These findings provide new insights into the potential therapeutic use of rh relaxin-2 for OA treatment through a novel mechanism.
Longevity Relevance Analysis
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Relaxin-2 mitigates TNF-α-induced cellular senescence in human primary chondrocytes by enhancing telomerase activity and modulating SIRT1/p53 signaling. This study addresses mechanisms of cellular senescence, which is a key aspect of aging and age-related diseases, suggesting potential therapeutic avenues for longevity.
Elias Khaskia, Dipak Dahatonde, Raphael I Benhamou
· Advanced science (Weinheim, Baden-Wurttemberg, Germany)
· The Institute for Drug Research of the School of Pharmacy, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, 9112002, Israel.
· pubmed
Long noncoding RNAs (lncRNAs) regulate gene expression and play crucial roles in development and disease, including cancer. One important but still poorly understood lncRNA is TERRA (telomeric repeat-containing RNA), transcribed from telomeres and essential for telomere maintenan...
Long noncoding RNAs (lncRNAs) regulate gene expression and play crucial roles in development and disease, including cancer. One important but still poorly understood lncRNA is TERRA (telomeric repeat-containing RNA), transcribed from telomeres and essential for telomere maintenance, genome stability, and cellular aging. TERRA adopts two structural features,R-loops and G-quadruplexes (G4s), that drive its biological activity. Its dysregulation is linked to telomere dysfunction and is prominent in Alternative Lengthening of Telomeres (ALT) cancers, where TERRA is highly upregulated and promotes telomere recombination. Here, first-in-class small molecules targeting TERRA using RIBOTAC (Ribonuclease-Targeting Chimera) technology is developed. These compounds selectively bind TERRA's G4 structures and recruit RNase L, inducing its degradation while sparing DNA G4s and other G4 RNAs. This selectivity results from ternary complex formation with RNase L and the repetitive G4 motifs enriched in TERRA. TERRA-RIBOTACs in HeLa and U2OS cells, the latter representing an ALT cancer model, are evaluated. TERRA degradation, particularly at 7p, 13q, 15q, and 20q loci, impairs telomere function and reduces colony formation. Manipulating lncRNAs like TERRA with chemical tools opens new avenues for drug development and deepens the understanding of RNA-based regulation in cancer biology.
Longevity Relevance Analysis
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The paper claims that small molecules targeting TERRA can induce its degradation, impairing telomere function and reducing colony formation in cancer cells. The focus on TERRA's role in telomere maintenance and its implications for cellular aging and genome stability makes this research relevant to understanding mechanisms of aging and potential interventions.
Rahman, R., Epstein, E. T., Murphy, S. ...
· cell biology
· UMass Chan Medical School and UMass Chan Medical School and Broad Institute of MIT and Harvard, Cambridge, MA
· biorxiv
Background & Aims The liver is a vital organ composed of parenchymal, nonparenchymal, and immune cell populations. Single-cell sequencing approaches now provide the opportunity to understand how sex and age influence gene expression and cellular function across cell types within ...
Background & Aims The liver is a vital organ composed of parenchymal, nonparenchymal, and immune cell populations. Single-cell sequencing approaches now provide the opportunity to understand how sex and age influence gene expression and cellular function across cell types within the liver. Methods We analyzed the cellular composition and interactions for the human liver through single-nucleus RNA sequencing (snRNA-seq), incorporating insights from 37 healthy liver samples. The dataset contains cells from female and male donors spanning more than seven decades of life, and analysis was performed to evaluate the impact of sex and age on differential gene expression, pathway enrichment, and predicted ligand-receptor and protein-protein interactions. Results Excluding the X and Y chromosomes, we identified 374 genes uniquely enriched in cells of the female liver and 520 genes enriched in cells of the male liver. Differential expression analysis defined unique circuitries enriched within each cell type between females and males and their impact on cell-cell communication and response to external signals, including enrichment of cholesterol/lipid metabolism, transforming growth factor beta (TGF-beta) signaling, and fibronectin (FN1) production in female cells and bone morphogenic protein (BMP) signaling in male cells. With increased age, we observe a greater diversity in gene expression, including enrichment of genes that regulate neuregulin (NGR) signaling at older ages, while genes regulating insulin growth factor (IGF) signaling are enriched at younger ages. Senescence signatures were also identified for each cell type within the liver. Conclusions These results define the activities of healthy cell types within the liver across sex and age and provide a foundation for studies to examine how ancestry, geography, and disease states influence liver function within these contexts. Impact and Implications Our study analyzes 37 human liver samples at the single-cell level to understand how sex and age influence gene expression, cell interactions, and response to signals across liver cell types and sub-types. These findings are of particular significance for researchers who need to understand how sex and age may influence the response of individual cell types to injury or treatment of injury. This dataset will also provide a healthy reference for future studies to understand how ancestry, geography, and disease states shape liver biology across age and sex.
Longevity Relevance Analysis
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The study identifies how sex and age influence gene expression and cellular interactions in the healthy human liver. This research is relevant as it explores fundamental biological differences that could inform interventions targeting aging processes and age-related diseases.
Yunhui Zhang, Quanfeng Li, Xiaoshuai Peng ...
· Materials today. Bio
· Department of Orthopedics, The Eighth Affiliated Hospital, Sun Yat-sen University, 3025# Shennan Road, Shenzhen, 518000, PR China.
· pubmed
Osteoporosis is an age-related bone metabolic disease characterized by a persistent bone mass decrease and bone structure destruction. Osteoclasts, important cells in the bone remodelling process, are closely associated with the onset and progression of osteoporosis; however, the...
Osteoporosis is an age-related bone metabolic disease characterized by a persistent bone mass decrease and bone structure destruction. Osteoclasts, important cells in the bone remodelling process, are closely associated with the onset and progression of osteoporosis; however, the regulatory mechanisms involved remain unclear. In this study, TFE3 cytoplasmic translocation inhibited LAMP2A expression in osteoclasts and precursors in elderly individuals with osteoporosis and the downregulation of LAMP2A expression mediated the attenuation of chaperone-mediated autophagy (CMA). This inhibition prevented intracellular CCR5 degradation, increased the osteoclast differentiation of osteoclast precursor cells, and enhanced the bone resorption activity of mature osteoclasts, leading to bone loss and remodelling. In addition, we constructed osteoclast-targeted nanoparticles carrying CMA activators and demonstrated that enhancing osteoclast CMA activity in vivo inhibited the abnormal bone resorption activity of osteoclasts, thereby effectively increasing bone mass and alleviating osteoporosis progression. This study revealed that LAMP2A-mediated CMA activity in osteoclasts and their precursors negatively regulates osteoclast differentiation and bone resorption activities both in vivo and in vitro. The attenuation of LAMP2A-mediated CMA activity plays an important role in the development of osteoporosis, and enhancing LAMP2A-mediated CMA activity represents a potential therapeutic strategy for osteoporosis.
Longevity Relevance Analysis
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Enhancing LAMP2A-mediated chaperone-mediated autophagy in osteoclasts can inhibit bone resorption and alleviate osteoporosis progression. This paper addresses a mechanism related to bone metabolism and aging, potentially contributing to strategies that target age-related diseases.